RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SMIM22K7EJ46 135 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 M0QYG6 137 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 DCLK1O15075 740 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 NXPH3O95157 252 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 AHSGP02765 367 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 CYP2D6P10635 497 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 PRAMEF17Q5VTA0 474 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 DTX2Q86UW9 622 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 TBC1D5Q92609 795 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 MACROD1Q9BQ69 325 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 BHMT2Q9H2M3 363 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 SAGE1Q9NXZ1 904 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 ABCF2Q9UG63 623 aa8.12□□□□□ -1.11
USP53-206ENST00000510737 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
USP53-206ENST00000510737 KIF24Q5T7B8 1368 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 SLX4Q8IY92 1834 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 FTH1P19P0C7X4 201 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 TUBA4AP68366 448 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 PTPN21Q16825 1174 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 ZNF618Q5T7W0 954 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 MORN5Q5VZ52 161 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 SLC18B1Q6NT16 456 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 HEATR3Q7Z4Q2 680 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 GLIS2Q9BZE0 524 aaPredicted RBP8.11□□□□□ -1.11
USP53-206ENST00000510737 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 POLHQ9Y253 713 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 ZBTB1Q9Y2K1 713 aa8.11□□□□□ -1.11
USP53-206ENST00000510737 PPP6CO00743 305 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
USP53-206ENST00000510737 MOSPD3O75425 235 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
USP53-206ENST00000510737 IL6RP08887 468 aaPredicted RBP8.1□□□□□ -1.11
USP53-206ENST00000510737 CTGFP29279 349 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 HK3P52790 923 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 AARS2Q5JTZ9 985 aaKnown RBP8.1□□□□□ -1.11
USP53-206ENST00000510737 ANKRD16Q6P6B7 361 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 DLK2Q6UY11 383 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 SLC29A4Q7RTT9 530 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 FANCBQ8NB91 859 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 FAM46DQ8NEK8 389 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 FCRL4Q96PJ5 515 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 SLC13A1Q9BZW2 595 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 ZDHHC8Q9ULC8 765 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 SSX2IPQ9Y2D8 614 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 COL15A1P39059 1388 aa8.1□□□□□ -1.11
USP53-206ENST00000510737 ZNF521Q96K83 1311 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 PRRT4C9JH25 899 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 PDCP20941 246 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 CYP2C18P33260 490 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 MTHFSP49914 203 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 EIF5P55010 431 aaKnown RBP8.09□□□□□ -1.11
USP53-206ENST00000510737 CYP4F2P78329 520 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 PKN2Q16513 984 aaKnown RBP8.09□□□□□ -1.11
USP53-206ENST00000510737 TREML2Q5T2D2 321 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 PRR18Q8N4B5 295 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 SLC46A1Q96NT5 459 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 WDCPQ9H6R7 721 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.09□□□□□ -1.11
USP53-206ENST00000510737 HESX1Q9UBX0 185 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 TJP1Q07157 1748 aa8.09□□□□□ -1.11
USP53-206ENST00000510737 ANKRD31Q8N7Z5 1873 aa8.09□□□□□ -1.12
USP53-206ENST00000510737 MYO1FO00160 1098 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 ADAMTS3O15072 1205 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 TOP3BO95985 862 aaKnown RBP8.08□□□□□ -1.12
USP53-206ENST00000510737 CERS1P27544 350 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 PTGER1P34995 402 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 HUNKP57058 714 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 EEFSECP57772 596 aaKnown RBP8.08□□□□□ -1.12
USP53-206ENST00000510737 RGMBQ6NW40 437 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 PRPF38AQ8NAV1 312 aaKnown RBP8.08□□□□□ -1.12
USP53-206ENST00000510737 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 SIK2Q9H0K1 926 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 NRIP3Q9NQ35 241 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 DUSP22Q9NRW4 184 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 SERTAD3Q9UJW9 196 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 TRPM7Q96QT4 1865 aa8.08□□□□□ -1.12
USP53-206ENST00000510737 BCORQ6W2J9 1755 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 FNDC1Q4ZHG4 1894 aaPredicted RBP8.07□□□□□ -1.12
USP53-206ENST00000510737 KCNAB3O43448 404 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 DNAJB5O75953 348 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 PIM1P11309 404 aaPredicted RBP8.07□□□□□ -1.12
USP53-206ENST00000510737 ALDH9A1P49189 494 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 MAP2K6P52564 334 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 AMPD3Q01432 767 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 PLEKHO1Q53GL0 409 aaPredicted RBP8.07□□□□□ -1.12
USP53-206ENST00000510737 FAM160B1Q5W0V3 765 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 ZNF530Q6P9A1 599 aaPredicted RBP8.07□□□□□ -1.12
USP53-206ENST00000510737 RGMAQ96B86 450 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 TTYH3Q9C0H2 523 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 SPRTNQ9H040 489 aaPredicted RBP8.07□□□□□ -1.12
USP53-206ENST00000510737 PCDHA1Q9Y5I3 950 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
USP53-206ENST00000510737 COL4A5P29400 1685 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 SLC16A3O15427 465 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms