RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 PDCL3Q9H2J4 239 aa20.64■□□□□ 0.89
FGFR4-211ENST00000509511 GKN1Q9NS71 199 aa20.64■□□□□ 0.89
FGFR4-211ENST00000509511 SH3BP1Q9Y3L3 701 aa20.64■□□□□ 0.89
FGFR4-211ENST00000509511 WNT6Q9Y6F9 365 aa20.64■□□□□ 0.89
FGFR4-211ENST00000509511 PIK3R2O00459 728 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 SLC9A3R1O14745 358 aaPredicted RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 GLULP15104 373 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 SOX5P35711 763 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 CLCN5P51795 746 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 MLLT6P55198 1093 aaPredicted RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 ZXDBP98169 803 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 IER5LQ5T953 404 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 BTBD8Q5XKL5 378 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 TRIM68Q6AZZ1 485 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 ASTLQ6HA08 431 aaPredicted RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 BHLHA9Q7RTU4 235 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 CACNA2D4Q7Z3S7 1137 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 DDX23Q9BUQ8 820 aaKnown RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 LHX5Q9H2C1 402 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 EBF3Q9H4W6 596 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 C8orf33Q9H7E9 229 aaPredicted RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 OLA1Q9NTK5 396 aaKnown RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 GTSE1Q9NYZ3 720 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 MRPS17Q9Y2R5 130 aaKnown RBP20.63■□□□□ 0.89
FGFR4-211ENST00000509511 COL4A3Q01955 1670 aa20.63■□□□□ 0.89
FGFR4-211ENST00000509511 A0A1W2PQC6 194 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 KANSL1LA0AUZ9 987 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 E2F8A0AVK6 867 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 YJEFN3A6XGL0 299 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 E7ENQ6 273 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 MAN2B1O00754 1011 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 TEX33O43247 280 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 GFPT2O94808 682 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 NFATC1O95644 943 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 TBX18O95935 607 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 IRF1P10914 325 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 AOC1P19801 751 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 STAT1P42224 750 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 RPL34P49207 117 aaKnown RBP20.62■□□□□ 0.89
FGFR4-211ENST00000509511 RUNX3Q13761 415 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 ZNF852Q6ZMS4 543 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 MIB1Q86YT6 1006 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
FGFR4-211ENST00000509511 EPS8L1Q8TE68 723 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 IPO4Q8TEX9 1081 aaKnown RBP20.62■□□□□ 0.89
FGFR4-211ENST00000509511 TRIM62Q9BVG3 475 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 SLC4A5Q9BY07 1137 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 MIS12Q9H081 205 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 HPS4Q9NQG7 708 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 TBC1D14Q9P2M4 693 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 RASAL2Q9UJF2 1139 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 LSM7Q9UK45 103 aaKnown RBP20.62■□□□□ 0.89
FGFR4-211ENST00000509511 NUDT5Q9UKK9 219 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 STRIP2Q9ULQ0 834 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 KMT2EQ8IZD2 1858 aa20.62■□□□□ 0.89
FGFR4-211ENST00000509511 E5RJQ4 531 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 SPECC1L-ADORA2AF8WAN1 911 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 MDM4O15151 490 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 ARSAP15289 507 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 CTHP32929 405 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 SNX16P57768 344 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 FANCCQ00597 558 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 EFEMP1Q12805 493 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 UBXN2BQ14CS0 331 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 EML3Q32P44 896 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 TAF3Q5VWG9 929 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 BSPRYQ5W0U4 402 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 RALGPS2Q86X27 583 aaPredicted RBP20.61■□□□□ 0.89
FGFR4-211ENST00000509511 ZNF677Q86XU0 584 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 FMNL3Q8IVF7 1028 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 PJA1Q8NG27 643 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 RNF139Q8WU17 664 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 NDRG1Q92597 394 aaKnown RBP20.61■□□□□ 0.89
FGFR4-211ENST00000509511 FOXQ1Q9C009 403 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 SYNCQ9H7C4 482 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 LTB4R2Q9NPC1 389 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 ABCC13Q9NSE7 274 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 MARCH2Q9P0N8 246 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 CYTH4Q9UIA0 394 aa20.61■□□□□ 0.89
FGFR4-211ENST00000509511 SCAMP3O14828 347 aaKnown RBP20.6■□□□□ 0.89
FGFR4-211ENST00000509511 LSM8O95777 96 aaKnown RBP20.6■□□□□ 0.89
FGFR4-211ENST00000509511 LTFP02788 710 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 VCPP55072 806 aaKnown RBP20.6■□□□□ 0.89
FGFR4-211ENST00000509511 AMPD2Q01433 879 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 NOP9Q86U38 636 aaKnown RBP20.6■□□□□ 0.89
FGFR4-211ENST00000509511 TMEM35BQ8NCS4 154 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 TTC8Q8TAM2 541 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 CLEC4CQ8WTT0 213 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 FAM3CQ92520 227 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 FAM149B1Q96BN6 582 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 PPP1R13BQ96KQ4 1090 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 KLF16Q9BXK1 252 aaPredicted RBP20.6■□□□□ 0.89
FGFR4-211ENST00000509511 HCN4Q9Y3Q4 1203 aa20.6■□□□□ 0.89
FGFR4-211ENST00000509511 GABBR2O75899 941 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 TPM3P06753 285 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 SOX9P48436 509 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 NR1H3Q13133 447 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 TMEM110Q86TL2 294 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 MSANTD4Q8NCY6 345 aa20.59■□□□□ 0.89
FGFR4-211ENST00000509511 EDEM1Q92611 657 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms