RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 DNAJB1P25685 340 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 C8orf74Q6P047 294 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 RNF34Q969K3 372 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.57
PROM1-207ENST00000508167 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
PROM1-207ENST00000508167 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 CCL16O15467 120 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 DNA2P51530 1060 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 NOMO3P69849 1222 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 MRPL58Q14197 206 aaKnown RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 PMF1Q6P1K2 205 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 FAM171BQ6P995 826 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 CLEC20AQ6ZU45 233 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 DDX42Q86XP3 938 aaKnown RBP eCLIP11.51□□□□□ -0.57
PROM1-207ENST00000508167 RNF139Q8WU17 664 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 GRHL1Q9NZI5 618 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 USTQ9Y2C2 406 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 TSC2P49815 1807 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 MYL4P12829 197 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 GPC5P78333 572 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 PLD1Q13393 1074 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 DUPD1Q68J44 220 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 EXOC4Q96A65 974 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 ULBP1Q9BZM6 244 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 ZMYND15Q9H091 742 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 LMAN2LQ9H0V9 348 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 MED4Q9NPJ6 270 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 MAN1C1Q9NR34 630 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 YIPF1Q9Y548 306 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 XPO1O14980 1071 aaKnown RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 RNF40O75150 1001 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 PYGMP11217 842 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 COMTP21964 271 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 YWHAQP27348 245 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 GJC1P36383 396 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 GUCY2DQ02846 1103 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 LRIT3Q3SXY7 679 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 BTBD8Q5XKL5 378 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 PEX26Q7Z412 305 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 ITIH5Q86UX2 942 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 NUP93Q8N1F7 819 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 WDTC1Q8N5D0 677 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 SMOQ99835 787 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 LHX5Q9H2C1 402 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 MRPL47Q9HD33 250 aaKnown RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 FNIP2Q9P278 1114 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 FNDC1Q4ZHG4 1894 aaPredicted RBP11.51□□□□□ -0.57
PROM1-207ENST00000508167 BEST1O76090 585 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 EPCAMP16422 314 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 GPD2P43304 727 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 RHOT2Q8IXI1 618 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 CPXM1Q96SM3 734 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 TRPC7Q9HCX4 862 aa11.51□□□□□ -0.57
PROM1-207ENST00000508167 A0A1W2PPC1 479 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 XYLBO75191 536 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 KRT3P12035 628 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 RRM1P23921 792 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 SLC5A3P53794 718 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 MCOLN2Q8IZK6 566 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 SCAMP5Q8TAC9 235 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 MRPL38Q96DV4 380 aaKnown RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 HSFY1Q96LI6 401 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 FBXO44Q9H4M3 255 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 AMACRQ9UHK6 382 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 PRRC2BQ5JSZ5 2229 aaKnown RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 MYO1FO00160 1098 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 TTI1O43156 1089 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 HAPLN1P10915 354 aaPredicted RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 MCM3P25205 808 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 IFI16Q16666 785 aaKnown RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 CDO1Q16878 200 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 INSL5Q9Y5Q6 135 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 LTBP2Q14767 1821 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 ZBED1O96006 694 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 CSH1P0DML2 217 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 CSH2P0DML3 217 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 KLF1Q13351 362 aaPredicted RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 ZNF211Q13398 564 aaPredicted RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 GRIN2CQ14957 1233 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 SND1Q7KZF4 910 aaKnown RBP eCLIP11.5□□□□□ -0.57
PROM1-207ENST00000508167 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 SLC22A17Q8WUG5 538 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms