RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 DCNP07585 359 aaKnown RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 CYP11B1P15538 503 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 CD72P21854 359 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 HOXD11P31277 338 aaPredicted RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 SOX5P35711 763 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 ATP5C1P36542 298 aaKnown RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 STAT1P42224 750 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 RPL34P49207 117 aaKnown RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 ZNF445P59923 1031 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 FANCCQ00597 558 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 MTF1Q14872 753 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 SCD5Q86SK9 330 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 FMNL3Q8IVF7 1028 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 SH3RF2Q8TEC5 729 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 IRGQQ8WZA9 623 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 NOX5Q96PH1 765 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 NMUR1Q9HB89 426 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNX25-204ENST00000506896 MTF2Q9Y483 593 aaPredicted RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 CPQQ9Y646 472 aa20.86■□□□□ 0.93
SNX25-204ENST00000506896 KIF26AQ9ULI4 1882 aaPredicted RBP20.86■□□□□ 0.93
SNX25-204ENST00000506896 LEFTY2O00292 366 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 SART1O43290 800 aaKnown RBP20.85■□□□□ 0.93
SNX25-204ENST00000506896 RARGP13631 454 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 LCP1P13796 627 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 PGFP49763 221 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 RGS7P49802 495 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 MLLT6P55198 1093 aaPredicted RBP20.85■□□□□ 0.93
SNX25-204ENST00000506896 YWHAGP61981 247 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNX25-204ENST00000506896 FZD5Q13467 585 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 NR1I3Q14994 352 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 TPRG1Q6ZUI0 275 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 CACNA2D4Q7Z3S7 1137 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 ZNF687Q8N1G0 1237 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 CSGALNACT1Q8TDX6 532 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
SNX25-204ENST00000506896 NELL2Q99435 816 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 LTB4R2Q9NPC1 389 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 ST7Q9NRC1 585 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 OSER1Q9NX31 292 aa20.85■□□□□ 0.93
SNX25-204ENST00000506896 HELZP42694 1942 aaKnown RBP20.84■□□□□ 0.93
SNX25-204ENST00000506896 USP34Q70CQ2 3546 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 FAM170BA6NMN3 283 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 UBASH3AP57075 661 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 SNX16P57768 344 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 DAOAP59103 153 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 GOLGA8FQ08AF8 430 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 GOLGA8DPQ0D2H9 430 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 PDGFRLQ15198 375 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 ZNF677Q86XU0 584 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 GOLGA1Q92805 767 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 PHOX2BQ99453 314 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 FAM83CQ9BQN1 747 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 SLC4A5Q9BY07 1137 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 PDCL3Q9H2J4 239 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 SMPD4Q9NXE4 827 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 DNMT3LQ9UJW3 386 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 MYO6Q9UM54 1294 aa20.84■□□□□ 0.93
SNX25-204ENST00000506896 GFPT2O94808 682 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 TPM3P06753 285 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 CCDC172P0C7W6 258 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 TARSP26639 723 aaKnown RBP20.83■□□□□ 0.93
SNX25-204ENST00000506896 PDCLQ13371 301 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 C10orf120Q5SQS8 335 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 C1orf228Q6PIY5 440 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 ZNF852Q6ZMS4 543 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 BHLHA9Q7RTU4 235 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 TMEM110Q86TL2 294 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 EPS8L1Q8TE68 723 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 OSCP1Q8WVF1 389 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 CLDN23Q96B33 292 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 MSANTD3Q96H12 275 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 ZFRQ96KR1 1074 aaKnown RBP20.83■□□□□ 0.93
SNX25-204ENST00000506896 TRIM62Q9BVG3 475 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 GKN1Q9NS71 199 aa20.83■□□□□ 0.93
SNX25-204ENST00000506896 OLA1Q9NTK5 396 aaKnown RBP20.83■□□□□ 0.93
SNX25-204ENST00000506896 VPS13AQ96RL7 3174 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 YJEFN3A6XGL0 299 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 E7ENQ6 273 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 MAN2B1O00754 1011 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 SLC9A3R1O14745 358 aaPredicted RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 GABBR2O75899 941 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 LSM8O95777 96 aaKnown RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 ZXDBP98169 803 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 UBXN2BQ14CS0 331 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 BSPRYQ5W0U4 402 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 BTBD8Q5XKL5 378 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 RSRC2Q7L4I2 434 aaKnown RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 TMEM35BQ8NCS4 154 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 RIN3Q8TB24 985 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 DDX1Q92499 740 aaKnown RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 ATOH1Q92858 354 aaPredicted RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 ATP2A3Q93084 1043 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 ZFYVE19Q96K21 471 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 C8orf33Q9H7E9 229 aaPredicted RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 ABCC13Q9NSE7 274 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 DUS2Q9NX74 493 aaKnown RBP20.82■□□□□ 0.92
SNX25-204ENST00000506896 CFAP97Q9P2B7 532 aa20.82■□□□□ 0.92
SNX25-204ENST00000506896 E2F8A0AVK6 867 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms