RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 PKN3Q6P5Z2 889 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 HTR3DQ70Z44 454 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 RSRC2Q7L4I2 434 aaKnown RBP16.36■□□□□ 0.21
DDR1-258ENST00000506573 ZNF276Q8N554 614 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 SLC4A11Q8NBS3 891 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 KCNV2Q8TDN2 545 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 TATDN2Q93075 761 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 SLC35C1Q96A29 364 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 ZFRQ96KR1 1074 aaKnown RBP16.36■□□□□ 0.21
DDR1-258ENST00000506573 NT5C1BQ96P26 610 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 HHIPQ96QV1 700 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 DCLK3Q9C098 648 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 CDV3Q9UKY7 258 aaKnown RBP16.36■□□□□ 0.21
DDR1-258ENST00000506573 STRIP2Q9ULQ0 834 aa16.36■□□□□ 0.21
DDR1-258ENST00000506573 HELZP42694 1942 aaKnown RBP16.36■□□□□ 0.21
DDR1-258ENST00000506573 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 HHLA1C9JL84 531 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 SCAMP3O14828 347 aaKnown RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 PMM2O15305 246 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 PXNP49023 591 aaPredicted RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 FMO5P49326 533 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 DGKEP52429 567 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 UBE2HP62256 183 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 PAK1Q13153 545 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 ELF2Q15723 593 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 EOGTQ5NDL2 527 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 GPRIN1Q7Z2K8 1008 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 BBS7Q8IWZ6 715 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 TRIML1Q8N9V2 468 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 USP33Q8TEY7 942 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 KLF16Q9BXK1 252 aaPredicted RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 LRRC4Q9HBW1 653 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 POLMQ9NP87 494 aaPredicted RBP16.35■□□□□ 0.21
DDR1-258ENST00000506573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDR1-258ENST00000506573 C2orf42Q9NWW7 574 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 USP3Q9Y6I4 520 aa16.35■□□□□ 0.21
DDR1-258ENST00000506573 DMXL1Q9Y485 3027 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 K7EQS6 105 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 RHOBTB1O94844 696 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 TBX18O95935 607 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 VDRP11473 427 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 BST2Q10589 180 aaKnown RBP16.34■□□□□ 0.21
DDR1-258ENST00000506573 MORC3Q14149 939 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 E2F5Q15329 346 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 STILQ15468 1287 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 DGLUCYQ7Z3D6 616 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 FAM160A2Q8N612 972 aaPredicted RBP16.34■□□□□ 0.21
DDR1-258ENST00000506573 ARID3AQ99856 593 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 OLA1Q9NTK5 396 aaKnown RBP16.34■□□□□ 0.21
DDR1-258ENST00000506573 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 CTNND2Q9UQB3 1225 aa16.34■□□□□ 0.21
DDR1-258ENST00000506573 A0A0A0MRY4 1105 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 BIN1O00499 593 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
DDR1-258ENST00000506573 ZBED1O96006 694 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 PAEPP09466 180 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 SETSIPP0DME0 302 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 CHKAP35790 457 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 SLC6A11P48066 632 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 KDSRQ06136 332 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 LRMPQ12912 555 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 SRSF5Q13243 272 aaKnown RBP16.33■□□□□ 0.2
DDR1-258ENST00000506573 BYSLQ13895 437 aaKnown RBP16.33■□□□□ 0.2
DDR1-258ENST00000506573 CSRP2Q16527 193 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 RSPO4Q2I0M5 234 aaPredicted RBP16.33■□□□□ 0.2
DDR1-258ENST00000506573 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 GRAMD4Q6IC98 578 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 SDE2Q6IQ49 451 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 TTI2Q6NXR4 508 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 PIGZQ86VD9 579 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 MIB1Q86YT6 1006 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 BBS2Q9BXC9 721 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-258ENST00000506573 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
DDR1-258ENST00000506573 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 TULP3O75386 442 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 KLF8O95600 359 aaPredicted RBP16.32■□□□□ 0.2
DDR1-258ENST00000506573 CYBBP04839 570 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
DDR1-258ENST00000506573 TIE1P35590 1138 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 TKTL1P51854 596 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 YWHAGP61981 247 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDR1-258ENST00000506573 CRY1Q16526 586 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 GAB4Q2WGN9 574 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 TMEM270Q6UE05 265 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
DDR1-258ENST00000506573 TMEM25Q86YD3 366 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms