RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 SLC6A3Q01959 620 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SPARCL1Q14515 664 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 PLS1Q14651 629 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 RAB39AQ14964 217 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 IQCB1Q15051 598 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 TAF5Q15542 800 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 CCDC158Q5M9N0 1113 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 UNQ6494/PRO21346Q6UXR6 183 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 CATSPERGQ6ZRH7 1159 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 HEATR3Q7Z4Q2 680 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 AACSQ86V21 672 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 GLB1L2Q8IW92 636 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 NECAB1Q8N987 351 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SPPL3Q8TCT6 385 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 CALML6Q8TD86 181 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 GAB3Q8WWW8 586 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 ASB12Q8WXK4 309 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 MRPS27Q92552 414 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 CENPIQ92674 756 aaPredicted RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 ERCC4Q92889 916 aaPredicted RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 MUL1Q969V5 352 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 NMD3Q96D46 503 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 IQCDQ96DY2 449 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 NEK1Q96PY6 1258 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 NUDT16L1Q9BRJ7 211 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 PYM1Q9BRP8 204 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 FAM167BQ9BTA0 163 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SORBS1Q9BX66 1292 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 PITHD1Q9GZP4 211 aaPredicted RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 SENP6Q9GZR1 1112 aaPredicted RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 WDCPQ9H6R7 721 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 RIOX1Q9H6W3 641 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 PLEKHA5Q9HAU0 1116 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 TMEM8AQ9HCN3 771 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SARS2Q9NP81 518 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 OBP2BQ9NPH6 170 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SMYD2Q9NRG4 433 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 NSMCE4AQ9NXX6 385 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 MIS18AQ9NYP9 233 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 DNAI1Q9UI46 699 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 SYNPO2Q9UMS6 1093 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.54□□□□□ -1.682e-7■■□□□ 11.8
RFC1-208ENST00000504849 AKAP12Q02952 1782 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 N4BP2Q86UW6 1770 aaPredicted RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 RGPD1P0DJD0 1748 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 XRN1Q8IZH2 1706 aaKnown RBP4.54□□□□□ -1.68
RFC1-208ENST00000504849 CRYBG1Q9Y4K1 1723 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 EP400Q96L91 3159 aa4.54□□□□□ -1.68
RFC1-208ENST00000504849 MED23Q9ULK4 1368 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 MAP2P11137 1827 aaKnown RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 ACEP12821 1306 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 DLG5Q8TDM6 1919 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 A0A087X0M5 115 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CCDC196A0A1B0GTZ2 297 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 A0A1B0GX30 115 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 FAM170AA1A519 330 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 A6NLC8 198 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CLCA1A8K7I4 914 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 THAP12O43422 761 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 OPHN1O60890 802 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 SOAT2O75908 522 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ENDOD1O94919 500 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 PCDH8O95206 1070 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 KITP10721 976 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CDK4P11802 303 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CPA1P15085 419 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ME1P48163 572 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 POLE2P56282 527 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 NRG3P56975 720 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 VAMP2P63027 116 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 HTRA4P83105 476 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 CCZ1BP86790 482 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CCZ1P86791 482 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 PPP3CAQ08209 521 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ST3GAL1Q11201 340 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 PCOLCEQ15113 449 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 FAM110CQ1W6H9 321 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ADCK5Q3MIX3 580 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 BEND3Q5T5X7 828 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 AGAP9Q5VTM2 703 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ITPRIPL1Q6GPH6 555 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 JMJD6Q6NYC1 403 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 LEKR1Q6ZMV7 388 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 AOPEPQ8N6M6 819 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 NKAIN3Q8N8D7 197 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 FSIP1Q8NA03 581 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 SIMC1Q8NDZ2 872 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
RFC1-208ENST00000504849 FAM71BQ8TC56 605 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 KCNG4Q8TDN1 519 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 ADAMTS18Q8TE60 1221 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 KBTBD7Q8WVZ9 684 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 DPF2Q92785 391 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 EID2BQ96D98 161 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 RSRC1Q96IZ7 334 aaKnown RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 PPP1R13BQ96KQ4 1090 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 HEPHQ9BQS7 1158 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms