RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 DNAJC16Q9Y2G8 782 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 TOMM70O94826 608 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 CYP2F1P24903 491 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 TTC33Q6PID6 262 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 OTOP1Q7RTM1 612 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 TRIM69Q86WT6 500 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SCUBE1Q8IWY4 988 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SCUBE2Q9NQ36 999 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 PDGFCQ9NRA1 345 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 MAGEA13PA6NCF6 341 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 KPNA6O60684 536 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 JCHAINP01591 159 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 CPA3P15088 417 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 AQP5P55064 265 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 MPP3Q13368 585 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 KPNB1Q14974 876 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 BNC2Q6ZN30 1099 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 PGBD3Q8N328 593 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 RMND5AQ9H871 391 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 ZNF711Q9Y462 761 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 OAZ1P54368 228 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TP53BP2Q13625 1128 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 CYLC2Q14093 348 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 ERMARDQ5T6L9 678 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 MYO1HQ8N1T3 1032 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 FICDQ9BVA6 458 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 RRN3Q9NYV6 651 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 NCKIPSDQ9NZQ3 722 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 MPP6Q9NZW5 540 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 C2CD2LO14523 706 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TGFB2P61812 414 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 SKIV2LQ15477 1246 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 CTXN3Q4LDR2 81 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 DEPDC1Q5TB30 811 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 ZNF606Q8WXB4 792 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TBC1D13Q9NVG8 400 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 DOLKQ9UPQ8 538 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 CLK1P49759 484 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TKTL1P51854 596 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 MRPS31Q92665 395 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 DUSP9Q99956 384 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 NFE2Q16621 373 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 ZC4H2Q9NQZ6 224 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 TRPM5Q9NZQ8 1165 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 V9GYQ6 96 aa17.03■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM86B1E9PN63 330 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 H3BRB1 525 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 XPO1O14980 1071 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 RIPK2O43353 540 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 USP1O94782 785 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM86B2P0C5J1 330 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 ITGALP20701 1170 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 TMEM120AQ9BXJ8 343 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 EMILIN2Q9BXX0 1053 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 TUT1Q9H6E5 874 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 PRIM2P49643 509 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 CSE1LP55060 971 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 CSTF3Q12996 717 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 CLPBQ9H078 707 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 ASB7Q9H672 318 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 NAALADL1Q9UQQ1 740 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 RAD54BQ9Y620 910 aa17.02■□□□□ 0.32
PCDHA1-203ENST00000504120 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 GLRBP48167 497 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 RAP1GDS1P52306 607 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 ILF2Q12905 390 aaKnown RBP17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 NBPF12Q5TAG4 269 aaPredicted RBP17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 PCSK9Q8NBP7 692 aaKnown RBP17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 SEMA4AQ9H3S1 761 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 PCDHA3Q9Y5H8 950 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 SEPT3Q9UH03 358 aa17.02■□□□□ 0.31
PCDHA1-203ENST00000504120 DNALI1O14645 258 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 GLP2RO95838 553 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 BTKQ06187 659 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 CXCL9Q07325 125 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 TADA1Q96BN2 335 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 CAAP1Q9H8G2 361 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 GPAMQ9HCL2 828 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 VANGL2Q9ULK5 521 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms