RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 SLFN11Q7Z7L1 901 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 GPC2Q8N158 579 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 STX19Q8N4C7 294 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF555Q8NEP9 628 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 HEXDCQ8WVB3 486 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 C1orf54Q8WWF1 131 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 PTPRN2Q92932 1015 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 THAP2Q9H0W7 228 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 RMND5AQ9H871 391 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 UXTQ9UBK9 157 aaPredicted RBP4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 DUX4Q9UBX2 424 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 ZMYM5Q9UJ78 669 aa4.91□□□□□ -1.62
NDFIP1-202ENST00000503388 KPNA5O15131 536 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 DNAJA2O60884 412 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CYP3A5P20815 502 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 RPL3P39023 403 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CTCFP49711 727 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PEX5P50542 639 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CDH17Q12864 832 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF211Q13398 564 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SPATS1Q496A3 300 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SWT1Q5T5J6 900 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 RWDD4Q6NW29 188 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 RNF180Q86T96 592 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 C4orf32Q8N8J7 132 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ARRDC4Q8NCT1 418 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 MCUQ8NE86 351 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 UHMK1Q8TAS1 419 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 BAP1Q92560 729 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 DCUN1D1Q96GG9 259 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 FAM161BQ96MY7 647 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SERPINB11Q96P15 392 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 HEMGNQ9BXL5 484 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC39A8Q9C0K1 460 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 COMMD8Q9NX08 183 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 MORF4L1Q9UBU8 362 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PCDHGC3Q9UN70 934 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CAPN6Q9Y6Q1 641 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CNTNAP2Q9UHC6 1331 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 IGKV6D-41A0A0C4DH26 115 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 C2orf81A6NN90 581 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF839A8K0R7 811 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 IFRD1O00458 451 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 VWA5AO00534 786 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 KCNQ2O43526 872 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 NDUFS3O75489 264 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PIGRP01833 764 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 APOA1P02647 267 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PSMA3P25788 255 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 EEF1DP29692 281 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PRDX6P30041 224 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CA8P35219 290 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 TCF7P36402 384 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 RPS6KA3P51812 740 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 FCGRTP55899 365 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 IRX5P78411 483 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ACVR2BQ13705 512 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 GTF2H3Q13889 308 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ZACNQ401N2 412 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ERMARDQ5T6L9 678 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 TDRD10Q5VZ19 366 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 TRIM68Q6AZZ1 485 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 APOBEC3HQ6NTF7 200 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 STRADAQ7RTN6 431 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PATL1Q86TB9 770 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 MYO1HQ8N1T3 1032 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ETNPPLQ8TBG4 499 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 IRGQQ8WZA9 623 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 VPS33AQ96AX1 596 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 INPP4AQ96PE3 977 aaPredicted RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 TAAR1Q96RJ0 339 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PRMT1Q99873 361 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 NTPCRQ9BSD7 190 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SPATA16Q9BXB7 569 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ING2Q9H160 280 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 CDC42EP4Q9H3Q1 356 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 C10orf88Q9H8K7 445 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 POLG2Q9UHN1 485 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF180Q9UJW8 692 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 PRPF19Q9UMS4 504 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 LRCH1Q9Y2L9 728 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 COQ4Q9Y3A0 265 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 TNPO3Q9Y5L0 923 aaKnown RBP4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.62
NDFIP1-202ENST00000503388 HEATR9A2RTY3 570 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC15A5A6NIM6 579 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SPDYE16A6NNV3 312 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 EVPLLA8MZ36 301 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 B4GALT4O60513 344 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 VPS26AO75436 327 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 MAFO75444 373 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 FGF19O95750 216 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 APRTP07741 180 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TPBGLP0DKB5 382 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 VCAM1P19320 739 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 IBSPP21815 317 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 HMOX2P30519 316 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NOS2P35228 1153 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms