RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 SLC45A1Q9Y2W3 748 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 LPXNO60711 386 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 AVILO75366 819 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 KRT16P08779 473 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 TROVE2P10155 538 aaKnown RBP eCLIP17.22■□□□□ 0.35
VCAN-204ENST00000502527 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 GCLCP48506 637 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 HDAC4P56524 1084 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 YWHAZP63104 245 aaKnown RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.35
VCAN-204ENST00000502527 PPP6R3Q5H9R7 873 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 SYCP2LQ5T4T6 812 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 RAB3IPQ96QF0 476 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
VCAN-204ENST00000502527 ETNK1Q9HBU6 452 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 NME7Q9Y5B8 376 aa17.22■□□□□ 0.35
VCAN-204ENST00000502527 A6NJR5 290 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 A8MXQ7 604 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 GABBR2O75899 941 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 TOMM70O94826 608 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 FGFR1P11362 822 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 ZFXP17010 805 aaPredicted RBP17.21■□□□□ 0.35
VCAN-204ENST00000502527 SCNN1AP37088 669 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 SLC18A2Q05940 514 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 FAAP100Q0VG06 881 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 SPDYAQ5MJ70 313 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 ARCQ7LC44 396 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 SLC26A11Q86WA9 606 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
VCAN-204ENST00000502527 CFAP36Q96G28 342 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 APOPT1Q96IL0 206 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
VCAN-204ENST00000502527 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
VCAN-204ENST00000502527 NRDE2Q9H7Z3 1164 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 SLC17A7Q9P2U7 560 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 MORF4L1Q9UBU8 362 aa17.21■□□□□ 0.35
VCAN-204ENST00000502527 WDR91A4D1P6 747 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 TRDMT1O14717 391 aaKnown RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 CYP2F1P24903 491 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 TMEM62Q0P6H9 643 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 BST2Q10589 180 aaKnown RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 DPYSL2Q16555 572 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 SLC26A9Q7LBE3 791 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 ZNF276Q8N554 614 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 C7orf31Q8N865 590 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 ANKRD52Q8NB46 1076 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 MCUQ8NE86 351 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 LRRC39Q96DD0 335 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 ABHD16BQ9H3Z7 469 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 CNTN3Q9P232 1028 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 UBQLN1Q9UMX0 589 aaKnown RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 TRIM33Q9UPN9 1127 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 GPR32O75388 356 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 APRTP07741 180 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 GSTA2P09210 222 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 L1CAMP32004 1257 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 NEK3P51956 506 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 BCAT1P54687 386 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 TTC39BQ5VTQ0 682 aaPredicted RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 ALKAL1Q6UXT8 129 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 CAND1Q86VP6 1230 aaKnown RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
VCAN-204ENST00000502527 CENPIQ92674 756 aaPredicted RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 SERAC1Q96JX3 654 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 TRIM6Q9C030 488 aaPredicted RBP17.2■□□□□ 0.34
VCAN-204ENST00000502527 LRMDAQ9H2I8 198 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 STK38LQ9Y2H1 464 aa17.2■□□□□ 0.34
VCAN-204ENST00000502527 CITO14578 2027 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 C2CD2LO14523 706 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GCATO75600 419 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 NR2C2P49116 596 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 LGSNQ5TDP6 509 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 FAXCQ5TGI0 409 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 CHSY1Q86X52 802 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 CRYBG2Q8N1P7 616 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 CCDC110Q8TBZ0 833 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 C11orf84Q9BUA3 381 aaPredicted RBP17.19■□□□□ 0.34
VCAN-204ENST00000502527 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 DHX35Q9H5Z1 703 aaKnown RBP17.19■□□□□ 0.34
VCAN-204ENST00000502527 POPDC2Q9HBU9 364 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 NPHS2Q9NP85 383 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 ZNF180Q9UJW8 692 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 TTLL3Q9Y4R7 772 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 HES2Q9Y543 173 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms