RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 EIF3DO15371 548 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAF4-212ENST00000498540 SH3BP5O60239 455 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 GREM1O60565 184 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 GJB3O75712 270 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 STAU1O95793 577 aaKnown RBP15.57■□□□□ 0.08
TRAF4-212ENST00000498540 RDXP35241 583 aaKnown RBP15.57■□□□□ 0.08
TRAF4-212ENST00000498540 CDH8P55286 799 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 TRPC3Q13507 836 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 TOGARAM2Q6ZUX3 1019 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 CHPFQ8IZ52 775 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 USP28Q96RU2 1077 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 MED10Q9BTT4 135 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 DMAP1Q9NPF5 467 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-212ENST00000498540 FAM92AA1XBS5 289 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 PRRT4C9JH25 899 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 CACNG3O60359 315 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF217O75362 1048 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 SYPP08247 313 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 TRIP6Q15654 476 aaKnown RBP15.56■□□□□ 0.08
TRAF4-212ENST00000498540 E2F4Q16254 413 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 PLEKHG6Q3KR16 790 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 SCARA5Q6ZMJ2 495 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 NUDT18Q6ZVK8 323 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 NELFCDQ8IXH7 590 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 FUKQ8N0W3 1084 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 XXYLT1Q8NBI6 393 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 ZMIZ2Q8NF64 920 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF507Q8TCN5 953 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 SMARCD1Q96GM5 515 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 GABRG3Q99928 467 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 NACA2Q9H009 215 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 KRT82Q9NSB4 513 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 KBTBD4Q9NVX7 518 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 MORC2Q9Y6X9 1032 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-212ENST00000498540 ATP8B3O60423 1300 aa15.56■□□□□ 0.08
TRAF4-212ENST00000498540 LAMA5O15230 3695 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 TLR5O60602 858 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 AP1G2O75843 785 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 BEST1O76090 585 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 TBX18O95935 607 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 FTH1P19P0C7X4 201 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 TYRP14679 529 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 MAOBP27338 520 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 ATICP31939 592 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 CASP4P49662 377 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 ASIC1P78348 528 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 SCAPQ12770 1279 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 HNRNPDQ14103 355 aaKnown RBP15.55■□□□□ 0.08
TRAF4-212ENST00000498540 SLC39A14Q15043 492 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 FAM26FQ5R3K3 315 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 TPGS1Q6ZTW0 290 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 NAXDQ8IW45 347 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 RGL4Q8IZJ4 473 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 PNPLA1Q8N8W4 532 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 PLEKHO2Q8TD55 490 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF419Q96HQ0 510 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-212ENST00000498540 MRGPRX1Q96LB2 322 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 SMOQ99835 787 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 BBS2Q9BXC9 721 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 KLF16Q9BXK1 252 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-212ENST00000498540 SDCBP2Q9H190 292 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 CACNA2D2Q9NY47 1150 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 GPSM3Q9Y4H4 160 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 PTPRBP23467 1997 aa15.55■□□□□ 0.08
TRAF4-212ENST00000498540 WASH3PC4AMC7 463 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 ZBTB24O43167 697 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-212ENST00000498540 NDUFS2O75306 463 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 CLSTN1O94985 981 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 CCDC130P13994 396 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 PDCP20941 246 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 SYT1P21579 422 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 GRIK2Q13002 908 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 SLC14A1Q13336 389 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 ORC1Q13415 861 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 CUL4AQ13619 759 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF699Q32M78 642 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 SDE2Q6IQ49 451 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 C19orf48Q6RUI8 117 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 ACOT1Q86TX2 421 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 ADAMTS14Q8WXS8 1223 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 P2RY11Q96G91 374 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
TRAF4-212ENST00000498540 FAM124BQ9H5Z6 455 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-212ENST00000498540 VRTNQ9H8Y1 702 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 COMMD8Q9NX08 183 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 MARK1Q9P0L2 795 aa15.54■□□□□ 0.08
TRAF4-212ENST00000498540 UBE4BO95155 1302 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 PHACTR2O75167 634 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 BIRC3Q13489 604 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 KIAA1324Q6UXG2 1013 aaKnown RBP15.53■□□□□ 0.08
TRAF4-212ENST00000498540 GPRIN1Q7Z2K8 1008 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 BHMTQ93088 406 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms