RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 C12orf76Q8N812 135 aaPredicted RBP2.73□□□□□ -1.97
SGMS1-205ENST00000498514 NGDNQ8NEJ9 315 aaKnown RBP2.73□□□□□ -1.97
SGMS1-205ENST00000498514 EDC3Q96F86 508 aaKnown RBP2.73□□□□□ -1.97
SGMS1-205ENST00000498514 SLC35A4Q96G79 324 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 TM2D2Q9BX73 214 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 MSRB1Q9NZV6 116 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 WNT16Q9UBV4 365 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 MED16Q9Y2X0 877 aa2.73□□□□□ -1.97
SGMS1-205ENST00000498514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 F8W810 466 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 GABRDO14764 452 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 FYB1O15117 783 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 USP12O75317 370 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 PAPSS2O95340 614 aaPredicted RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 HSD3B2P26439 372 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 EPHA3P29320 983 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 MTHFSP49914 203 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 TIRAPP58753 221 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 ODF1Q14990 250 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 SLC39A5Q6ZMH5 540 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 USP45Q70EL2 814 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 TRAPPC11Q7Z392 1133 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 NOP9Q86U38 636 aaKnown RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 SLC15A4Q8N697 577 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 LMO3Q8TAP4 145 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 OIT3Q8WWZ8 545 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 KAZALD1Q96I82 304 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 VN1R3Q9BXE9 311 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 FAM126AQ9BYI3 521 aaPredicted RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 NUAK2Q9H093 628 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 DNMT3BQ9UBC3 853 aaKnown RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 ANAPC4Q9UJX5 808 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 TRHDEQ9UKU6 1024 aa2.72□□□□□ -1.97
SGMS1-205ENST00000498514 SIRT4Q9Y6E7 314 aaPredicted RBP2.72□□□□□ -1.97
SGMS1-205ENST00000498514 SOCS5O75159 536 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 ZRANB2O95218 330 aaKnown RBP eCLIP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 ACAA1P09110 424 aaPredicted RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 HOXA11P31270 313 aaPredicted RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 SLC12A2P55011 1212 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 KPNB1Q14974 876 aaKnown RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 LMBRD2Q68DH5 695 aaPredicted RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 CELF5Q8N6W0 485 aaKnown RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 ELP5Q8TE02 316 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 MSI2Q96DH6 328 aaKnown RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 MTFMTQ96DP5 389 aaKnown RBP2.71□□□□□ -1.98
SGMS1-205ENST00000498514 FCRL5Q96RD9 977 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 RMI1Q9H9A7 625 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 FZD3Q9NPG1 666 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 TRIM36Q9NQ86 728 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 CNNM1Q9NRU3 951 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 ARL8BQ9NVJ2 186 aa2.71□□□□□ -1.98
SGMS1-205ENST00000498514 A0A087WWL8 130 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 TRBV5-3A0A0A0MS03 114 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 A0A1W2PPC1 479 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 RRHO14718 337 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 PRPF4O43172 522 aaKnown RBP eCLIP2.7□□□□□ -1.98
SGMS1-205ENST00000498514 LDB3O75112 727 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 UQCRC1P31930 480 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 DSCR9P59020 149 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 PGS1Q32NB8 556 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 ODF3L2Q3SX64 289 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 DDX42Q86XP3 938 aaKnown RBP eCLIP2.7□□□□□ -1.98
SGMS1-205ENST00000498514 DNAJB14Q8TBM8 379 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 RAPGEF4Q8WZA2 1011 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 PIGKQ92643 395 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 WDYHV1Q96HA8 205 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 CDK5RAP3Q96JB5 506 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 SLC13A1Q9BZW2 595 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 TRIM5Q9C035 493 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 MS4A7Q9GZW8 240 aaPredicted RBP2.7□□□□□ -1.98
SGMS1-205ENST00000498514 USP29Q9HBJ7 922 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 MLXIPLQ9NP71 852 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 PAPOLBQ9NRJ5 636 aaKnown RBP2.7□□□□□ -1.98
SGMS1-205ENST00000498514 CPA4Q9UI42 421 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 FZD4Q9ULV1 537 aa2.7□□□□□ -1.98
SGMS1-205ENST00000498514 SPATA31A1Q5TZJ5 1347 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 SLC22A23A1A5C7 686 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 EXOC5O00471 708 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 PODXLO00592 558 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 ATG13O75143 517 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 RPS6KB1P23443 525 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 CCND1P24385 295 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 HOXA7P31268 230 aaPredicted RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 MCM5P33992 734 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 COMPP49747 757 aaPredicted RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 GPC5P78333 572 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 TIAL1Q01085 375 aaKnown RBP eCLIP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 DDR1Q08345 913 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 ITKQ08881 620 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 SLC4A8Q2Y0W8 1093 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 NUGGCQ68CJ6 796 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 PNPLA1Q8N8W4 532 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 FAM71DQ8N9W8 422 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 P2RX7Q99572 595 aaKnown RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 C6orf106Q9H6K1 298 aaPredicted RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 AGO4Q9HCK5 861 aaKnown RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 PIH1D1Q9NWS0 290 aaKnown RBP2.69□□□□□ -1.98
SGMS1-205ENST00000498514 HIF1ANQ9NWT6 349 aa2.69□□□□□ -1.98
SGMS1-205ENST00000498514 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
SGMS1-205ENST00000498514 EVPLQ92817 2033 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms