RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ST3GAL2Q16842 350 aa6.4□□□□□ -1.38
MDM2-220ENST00000496959 SNX22Q96L94 193 aa6.4□□□□□ -1.38
MDM2-220ENST00000496959 FCRL4Q96PJ5 515 aa6.4□□□□□ -1.38
MDM2-220ENST00000496959 STRBPQ96SI9 672 aaKnown RBP6.4□□□□□ -1.38
MDM2-220ENST00000496959 NUP62CLQ9H1M0 184 aa6.4□□□□□ -1.38
MDM2-220ENST00000496959 CAPN11Q9UMQ6 739 aa6.4□□□□□ -1.38
MDM2-220ENST00000496959 SCAF8Q9UPN6 1271 aaKnown RBP6.4□□□□□ -1.38
MDM2-220ENST00000496959 ZNF521Q96K83 1311 aa6.4□□□□□ -1.39
MDM2-220ENST00000496959 A8MVJ9 347 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 PPEF2O14830 753 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 MT-ND5P03915 603 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 APEHP13798 732 aaKnown RBP6.39□□□□□ -1.39
MDM2-220ENST00000496959 PLCD1P51178 756 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 LARS2Q15031 903 aaKnown RBP6.39□□□□□ -1.39
MDM2-220ENST00000496959 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 MEX3CQ5U5Q3 659 aaKnown RBP6.39□□□□□ -1.39
MDM2-220ENST00000496959 VSTM1Q6UX27 236 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 LINC01465Q8N7H1 131 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 MAFAQ8NHW3 353 aaPredicted RBP6.39□□□□□ -1.39
MDM2-220ENST00000496959 WDYHV1Q96HA8 205 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 VPS50Q96JG6 964 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 VPS16Q9H269 839 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 DNAJB11Q9UBS4 358 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 RIMKLBQ9ULI2 386 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 MAFFQ9ULX9 164 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 PCDHGB6Q9Y5F9 930 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 SNX13Q9Y5W8 968 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 RIMBP3CA6NJZ7 1639 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 RIMBP3BA6NNM3 1639 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 RIMBP3Q9UFD9 1639 aa6.39□□□□□ -1.39
MDM2-220ENST00000496959 H3BNC9 293 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 AGPSO00116 658 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 FOXN3O00409 490 aaPredicted RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 TOP3BO95985 862 aaKnown RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 ATP5F1P24539 256 aaPredicted RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 GHRHRQ02643 423 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 CFHR3Q02985 330 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 KCNAB1Q14722 419 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 CLEC9AQ6UXN8 241 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 DCDC5Q6ZRR9 648 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 RNF44Q7L0R7 432 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 C11orf44Q8N8P7 122 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 OSR1Q8TAX0 266 aaPredicted RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 CUL5Q93034 780 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 UNKQ9C0B0 810 aaKnown RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 TBC1D23Q9NUY8 699 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 GAR1Q9NY12 217 aaKnown RBP6.38□□□□□ -1.39
MDM2-220ENST00000496959 IFT140Q96RY7 1462 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 ABCC8Q09428 1581 aa6.38□□□□□ -1.39
MDM2-220ENST00000496959 FCHO1O14526 889 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 BMP15O95972 392 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 KCNB1Q14721 858 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 USP49Q70CQ1 688 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
MDM2-220ENST00000496959 METTL25Q8N6Q8 603 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 C12orf76Q8N812 135 aaPredicted RBP6.37□□□□□ -1.39
MDM2-220ENST00000496959 PNPLA1Q8N8W4 532 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 ZNF398Q8TD17 642 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
MDM2-220ENST00000496959 PHKBQ93100 1093 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 TTC17Q96AE7 1141 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 ZDHHC12Q96GR4 267 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 NAF1Q96HR8 494 aaKnown RBP6.37□□□□□ -1.39
MDM2-220ENST00000496959 TMEM79Q9BSE2 394 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 BRIP1Q9BX63 1249 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 METTL14Q9HCE5 456 aaKnown RBP6.37□□□□□ -1.39
MDM2-220ENST00000496959 PNPLA8Q9NP80 782 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 ELOVL5Q9NYP7 299 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 PI4KBQ9UBF8 816 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
MDM2-220ENST00000496959 URB2Q14146 1524 aaKnown RBP6.36□□□□□ -1.39
MDM2-220ENST00000496959 E5RJQ4 531 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 ANXA2P07355 339 aaKnown RBP6.36□□□□□ -1.39
MDM2-220ENST00000496959 ADRA1DP25100 572 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 NTSR1P30989 418 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 MCM5P33992 734 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 EIF4A1P60842 406 aaKnown RBP6.36□□□□□ -1.39
MDM2-220ENST00000496959 CLCA4Q14CN2 919 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 MANEALQ5VSG8 457 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 CYB5RLQ6IPT4 315 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 RANBP10Q6VN20 620 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
MDM2-220ENST00000496959 PIGOQ8TEQ8 1089 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 SPRTNQ9H040 489 aaPredicted RBP6.36□□□□□ -1.39
MDM2-220ENST00000496959 SLC27A6Q9Y2P4 619 aa6.36□□□□□ -1.39
MDM2-220ENST00000496959 ARHGEF11O15085 1522 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 THAP12O43422 761 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 RBL1P28749 1068 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 TXNL4AP83876 142 aaKnown RBP6.35□□□□□ -1.39
MDM2-220ENST00000496959 DEUP1Q05D60 604 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 GALEQ14376 348 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 MFSD13AQ14CX5 517 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 RABEP1Q15276 862 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 Q4G0T1 1027 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 CC2D1BQ5T0F9 858 aaKnown RBP6.35□□□□□ -1.39
MDM2-220ENST00000496959 FMNL3Q8IVF7 1028 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 KRT78Q8N1N4 520 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms