RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CACTIN-AS1Q8N1I8 211 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 SPPL2BQ8TCT7 592 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 MIB2Q96AX9 1013 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 FUCA2Q9BTY2 467 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-219ENST00000495172 ANKEF1Q9NU02 776 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 GEMIN8Q9NWZ8 242 aaKnown RBP9.53□□□□□ -0.88
GARNL3-219ENST00000495172 TDRD6O60522 2096 aaKnown RBP9.52□□□□□ -0.88
GARNL3-219ENST00000495172 KLF18A0A0U1RQI7 1052 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 ABL1P00519 1130 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 KRT7P08729 469 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 GNLYP22749 145 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 ACP1P24666 158 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 HNRNPUQ00839 825 aaKnown RBP eCLIP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 GAD2Q05329 585 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 ILKQ13418 452 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 GRAMD4Q6IC98 578 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 SCN4BQ8IWT1 228 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 SSC4DQ8WTU2 575 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 TRMT2BQ96GJ1 504 aaKnown RBP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 MYRFLQ96LU7 910 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 HSD17B14Q9BPX1 270 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 TCHPQ9BT92 498 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 HAPLN2Q9GZV7 340 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 RPF1Q9H9Y2 349 aaKnown RBP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-219ENST00000495172 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
GARNL3-219ENST00000495172 A0A1B0GVM2 712 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 CDRT15L2A8MXV6 281 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 AGRPO00253 132 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 CYP26A1O43174 497 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 TSPAN3O60637 253 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 DTNBO60941 627 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 TNFSF15O95150 251 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 GJB6O95452 261 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 IGHV4-34P06331 123 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 IRF1P10914 325 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 PRKCHP24723 683 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 NAMPTP43490 491 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 ZBTB6Q15916 424 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 SFMBT2Q5VUG0 894 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 BTBD8Q5XKL5 378 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
GARNL3-219ENST00000495172 ADGRF2Q8IZF7 708 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 MMP21Q8N119 569 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 SPATA20Q8TB22 786 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 BICD2Q8TD16 824 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 CCDC12Q8WUD4 166 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-219ENST00000495172 PRCCQ92733 491 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-219ENST00000495172 DEPDC7Q96QD5 511 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 MTA3Q9BTC8 594 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 ACE2Q9BYF1 805 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-219ENST00000495172 UXTQ9UBK9 157 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-219ENST00000495172 PCDHB6Q9Y5E3 794 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 PCDHGA4Q9Y5G9 962 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 HIVEP3Q5T1R4 2406 aa9.51□□□□□ -0.89
GARNL3-219ENST00000495172 FAM47DPA6NHR8 397 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 NEDD8-MDP1E9PL57 170 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 M0R2N6 131 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SLC27A2O14975 620 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 VILLO15195 856 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 HOXC11O43248 304 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-219ENST00000495172 IGLV3-19P01714 112 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 ACADMP11310 421 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 CD27P26842 260 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 OXTRP30559 389 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 DUSP3P51452 185 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-219ENST00000495172 NPY5RQ15761 445 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 ISXQ2M1V0 245 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SCARA3Q6AZY7 606 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 CRTC1Q6UUV9 634 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 ZNF366Q8N895 744 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 KRI1Q8N9T8 703 aaKnown RBP9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SCFD1Q8WVM8 642 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SORCS1Q8WY21 1168 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 DRC1Q96MC2 740 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 PYM1Q9BRP8 204 aaKnown RBP9.5□□□□□ -0.89
GARNL3-219ENST00000495172 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SPHK2Q9NRA0 654 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 PLK2Q9NYY3 685 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 LRWD1Q9UFC0 647 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
GARNL3-219ENST00000495172 K7ERI5 159 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 CYB561D2O14569 222 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 SLC9A3R1O14745 358 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-219ENST00000495172 FFAR2O15552 330 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 PRPF3O43395 683 aaKnown RBP9.49□□□□□ -0.89
GARNL3-219ENST00000495172 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
GARNL3-219ENST00000495172 LYPLA2O95372 231 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 SEMA4FO95754 770 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 CYP11A1P05108 521 aa9.49□□□□□ -0.89
GARNL3-219ENST00000495172 MCF2P10911 925 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms