RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CYP17A1P05093 508 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 ATP1A3P13637 1013 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 PGFP49763 221 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 STX17P56962 302 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 GSDMDP57764 484 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 GAB4Q2WGN9 574 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 CDKAL1Q5VV42 579 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 SUMF1Q8NBK3 374 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 UBXN6Q9BZV1 441 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 EPC1Q9H2F5 836 aa13.89□□□□□ -0.19
ERCC3-209ENST00000494464 CHURC1-FNTBB4DL54 471 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 ATG13O75143 517 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 SERPINC1P01008 464 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 EGFP01133 1207 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 HOXA6P31267 233 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 OPRD1P41143 372 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 EIF2DP41214 584 aaKnown RBP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 GALK1P51570 392 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 BCAT1P54687 386 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 SLC8A3P57103 927 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 SGO2Q562F6 1265 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 RAB41Q5JT25 222 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 TTC30AQ86WT1 665 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 EZH1Q92800 747 aaPredicted RBP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 NACA2Q9H009 215 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 KCNF1Q9H3M0 494 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 NMUR1Q9HB89 426 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERCC3-209ENST00000494464 OSER1Q9NX31 292 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 CLIC5Q9NZA1 410 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 CFAP54Q96N23 3096 aa13.88□□□□□ -0.19
ERCC3-209ENST00000494464 A0A1W2PQH9 124 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 RNF40O75150 1001 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 ADH1CP00326 375 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
ERCC3-209ENST00000494464 PAEPP09466 180 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 VDRP11473 427 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
ERCC3-209ENST00000494464 UBASH3AP57075 661 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 GCNT1Q02742 428 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 GOLGA8FQ08AF8 430 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 GOLGA8DPQ0D2H9 430 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 LRMPQ12912 555 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 DHCR24Q15392 516 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 PKN3Q6P5Z2 889 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 PIGZQ86VD9 579 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 PPM1KQ8N3J5 372 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
ERCC3-209ENST00000494464 C2orf42Q9NWW7 574 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 KIAA1257Q9ULG3 409 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERCC3-209ENST00000494464 FAM186AA6NE01 2351 aa13.87□□□□□ -0.19
ERCC3-209ENST00000494464 O00370 1275 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 XPO1O14980 1071 aaKnown RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 SETSIPP0DME0 302 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 RARGP13631 454 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 BST2Q10589 180 aaKnown RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 GOLGA7BQ2TAP0 167 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 SCD5Q86SK9 330 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 LONP2Q86WA8 852 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 ARHGAP18Q8N392 663 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 ACDQ96AP0 544 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 KLF16Q9BXK1 252 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 HESX1Q9UBX0 185 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 DNMT3LQ9UJW3 386 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 NAGPAQ9UK23 515 aa13.86□□□□□ -0.19
ERCC3-209ENST00000494464 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
ERCC3-209ENST00000494464 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 HOXC11O43248 304 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-209ENST00000494464 GREM1O60565 184 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 TBX18O95935 607 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 IRF1P10914 325 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 RALAP11233 206 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 ADH5P11766 374 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 CD19P15391 556 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 CNR2P34972 360 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 PDE4CQ08493 712 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 STILQ15468 1287 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 PKDCCQ504Y2 493 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 RHBDF2Q6PJF5 856 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 TMEM270Q6UE05 265 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 HTR3DQ70Z44 454 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 VSTM4Q8IW00 320 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms