RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DMC1Q14565 340 aa33■■■□□ 2.87
LDB1-204ENST00000490751 C10orf120Q5SQS8 335 aa33■■■□□ 2.87
LDB1-204ENST00000490751 LAIR1Q6GTX8 287 aa33■■■□□ 2.87
LDB1-204ENST00000490751 HTR3DQ70Z44 454 aa33■■■□□ 2.87
LDB1-204ENST00000490751 TRIM59Q8IWR1 403 aa33■■■□□ 2.87
LDB1-204ENST00000490751 CAMKK1Q8N5S9 505 aa33■■■□□ 2.87
LDB1-204ENST00000490751 USP33Q8TEY7 942 aa33■■■□□ 2.87
LDB1-204ENST00000490751 SRRTQ9BXP5 876 aaKnown RBP33■■■□□ 2.87
LDB1-204ENST00000490751 SPHK2Q9NRA0 654 aa33■■■□□ 2.87
LDB1-204ENST00000490751 DNMT3LQ9UJW3 386 aa33■■■□□ 2.87
LDB1-204ENST00000490751 CCDC163A0A0D9SF12 145 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 ANTXRLA6NF34 631 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 P4HA2O15460 535 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 GREM1O60565 184 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 MESP2Q0VG99 397 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 C2orf27AQ580R0 203 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 CLIC5Q9NZA1 410 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 HESX1Q9UBX0 185 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 LSM7Q9UK45 103 aaKnown RBP32.99■■■□□ 2.87
LDB1-204ENST00000490751 EML5Q05BV3 1969 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 SPTBN4Q9H254 2564 aa32.99■■■□□ 2.87
LDB1-204ENST00000490751 HOXC11O43248 304 aaPredicted RBP32.98■■■□□ 2.87
LDB1-204ENST00000490751 KAT7O95251 611 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 APODP05090 189 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 RALAP11233 206 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 BCAT1P54687 386 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 KDSRQ06136 332 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 PDE4CQ08493 712 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 RAB41Q5JT25 222 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 CEP68Q76N32 757 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 TADA2BQ86TJ2 420 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 SFTPA1Q8IWL2 248 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 PPM1KQ8N3J5 372 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 LMO3Q8TAP4 145 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 ARHGEF4Q9NR80 690 aa32.98■■■□□ 2.87
LDB1-204ENST00000490751 PALM2-AKAP2B1ALY0 433 aaPredicted RBP32.97■■■□□ 2.87
LDB1-204ENST00000490751 TULP2O00295 520 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 VDRP11473 427 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 PLA2G4AP47712 749 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 MARSP56192 900 aaKnown RBP32.97■■■□□ 2.87
LDB1-204ENST00000490751 KCNH2Q12809 1159 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 ANO4Q32M45 955 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 BTBD8Q5XKL5 378 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 TMEM270Q6UE05 265 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 ARHGAP30Q7Z6I6 1101 aaPredicted RBP32.97■■■□□ 2.87
LDB1-204ENST00000490751 TMEM25Q86YD3 366 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 ZNF276Q8N554 614 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 KAT5Q92993 513 aa32.97■■■□□ 2.87
LDB1-204ENST00000490751 XPO1O14980 1071 aaKnown RBP32.96■■■□□ 2.87
LDB1-204ENST00000490751 ID4P47928 161 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 TKTL1P51854 596 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 BST2Q10589 180 aaKnown RBP32.96■■■□□ 2.87
LDB1-204ENST00000490751 MIB1Q86YT6 1006 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 ETFBKMTQ8IXQ9 262 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 NAT16Q8N8M0 369 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 GAB3Q8WWW8 586 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 CDK5RAP1Q96SZ6 601 aaKnown RBP32.96■■■□□ 2.87
LDB1-204ENST00000490751 PCDHB4Q9Y5E5 795 aa32.96■■■□□ 2.87
LDB1-204ENST00000490751 UTP18Q9Y5J1 556 aaKnown RBP eCLIP32.96■■■□□ 2.876e-17■□□□□ 8.1
LDB1-204ENST00000490751 O00370 1275 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 APBB3O95704 486 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 AFPP02771 609 aaKnown RBP32.95■■■□□ 2.87
LDB1-204ENST00000490751 GRIA2P42262 883 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 MRPS21P82921 87 aaKnown RBP32.95■■■□□ 2.87
LDB1-204ENST00000490751 ARHGAP18Q8N392 663 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 PHTF2Q8N3S3 785 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 GPR161Q8N6U8 529 aaKnown RBP32.95■■■□□ 2.87
LDB1-204ENST00000490751 RASAL2Q9UJF2 1139 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 KIAA1257Q9ULG3 409 aa32.95■■■□□ 2.87
LDB1-204ENST00000490751 AXIN1O15169 862 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 RPP40O75818 363 aaKnown RBP32.94■■■□□ 2.86
LDB1-204ENST00000490751 FGFR1OPO95684 399 aaKnown RBP32.94■■■□□ 2.86
LDB1-204ENST00000490751 RETP07949 1114 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 PAEPP09466 180 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 CCDC192P0DO97 292 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 ARHGEF19Q8IW93 802 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 CCDC33Q8N5R6 958 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 EHBP1Q8NDI1 1231 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 UBA3Q8TBC4 463 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 ULBP1Q9BZM6 244 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 LRRC4Q9HBW1 653 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 RWDD2AQ9UIY3 292 aa32.94■■■□□ 2.86
LDB1-204ENST00000490751 TULP3O75386 442 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 STC2O76061 302 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 ZBED1O96006 694 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 YWHAGP61981 247 aaKnown RBP eCLIP32.93■■■□□ 2.86
LDB1-204ENST00000490751 EFEMP1Q12805 493 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 RRAGAQ7L523 313 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 FAM160A2Q8N612 972 aaPredicted RBP32.93■■■□□ 2.86
LDB1-204ENST00000490751 TFAP2BQ92481 460 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 PARD6AQ9NPB6 346 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 DEC1Q9P2X7 70 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 MMP17Q9ULZ9 603 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 USP18Q9UMW8 372 aa32.93■■■□□ 2.86
LDB1-204ENST00000490751 A0A0A0MRY4 1105 aa32.92■■■□□ 2.86
LDB1-204ENST00000490751 SETSIPP0DME0 302 aa32.92■■■□□ 2.86
LDB1-204ENST00000490751 TGM1P22735 817 aa32.92■■■□□ 2.86
LDB1-204ENST00000490751 ANP32AP39687 249 aaKnown RBP32.92■■■□□ 2.86
LDB1-204ENST00000490751 PM20D1Q6GTS8 502 aa32.92■■■□□ 2.86
LDB1-204ENST00000490751 Q6ZNB5 142 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms