RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GOLGA8TH3BQL2 631 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 SMAPO00193 183 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 SERPINB8P50452 374 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 STXBP2Q15833 593 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 B3GNT6Q6ZMB0 384 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 C12orf50Q8NA57 414 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 JADE3Q92613 823 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 MASTLQ96GX5 879 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 TMEM79Q9BSE2 394 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 VIL1P09327 827 aaKnown RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 FDX1P10109 184 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 THRAP10827 490 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 KDELR1P24390 212 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 PDAP1Q13442 181 aaKnown RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 ATP1A4Q13733 1029 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 SPDYAQ5MJ70 313 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 TSHZ1Q6ZSZ6 1077 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 SIX6OS1Q8N1H7 587 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 OR5B17Q8NGF7 314 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 GABPB2Q8TAK5 448 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 TCF7L2Q9NQB0 619 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 SPRP35270 261 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 RGS2P41220 211 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 GTF2BQ00403 316 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 UGCGQ16739 394 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 VWA5B1Q5TIE3 1220 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 TDRD10Q5VZ19 366 aaKnown RBP13.26□□□□□ -0.29
SHOX2-205ENST00000490689 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 CPT1BQ92523 772 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 MMP19Q99542 508 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 PNPOQ9NVS9 261 aa13.26□□□□□ -0.29
SHOX2-205ENST00000490689 USP12O75317 370 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 ITGB3P05106 788 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 POLBP06746 335 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 VCLP18206 1134 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 STAT5BP51692 787 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 GABPAQ06546 454 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CDC16Q13042 620 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 C15orf59Q2T9L4 293 aaPredicted RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CLVS1Q8IUQ0 354 aaPredicted RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 TNS4Q8IZW8 715 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 KYQ8NBH2 561 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 SERAC1Q96JX3 654 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 DMAC2Q9NW81 257 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 PPM1HQ9ULR3 514 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CDYLQ9Y232 598 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 C15orf38-AP3S2A0A0A6YYH1 394 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 SAC3D1A6NKF1 404 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 TM7SF2O76062 418 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CFHP08603 1231 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CHRNA5P30532 468 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 MLH1P40692 756 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 ARPINQ7Z6K5 226 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 SLC7A6OSQ96CW6 309 aaPredicted RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CRAMP1Q96RY5 1269 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CYP3A4P08684 503 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 PTK2BQ14289 1009 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 AMHR2Q16671 573 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 FAM172AQ8WUF8 416 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CNDP1Q96KN2 507 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 CYP4F12Q9HCS2 524 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 SLC7A8Q9UHI5 535 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 RABGEF1Q9UJ41 708 aa13.25□□□□□ -0.29
SHOX2-205ENST00000490689 DRG1Q9Y295 367 aaKnown RBP13.25□□□□□ -0.29
SHOX2-205ENST00000490689 A0A1B0GVG6 124 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 AQP4P55087 323 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 GDF10P55107 478 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 OCA2Q04671 838 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DCTN2Q13561 401 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 NFIL3Q16649 462 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DENND1BQ6P3S1 775 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DDIASQ8IXT1 998 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 ATG4CQ96DT6 458 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 PRR11Q96HE9 360 aaPredicted RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TXLNGYQ9BZA5 131 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 SIK2Q9H0K1 926 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 EFCAB1Q9HAE3 211 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms