RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ADORA2BP29275 332 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 ATP5C1P36542 298 aaKnown RBP18.78■□□□□ 0.6
YIPF3-208ENST00000490447 IRX4P78413 519 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 UAP1L1Q3KQV9 507 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 LYSMD4Q5XG99 296 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 GRAMD4Q6IC98 578 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 SDE2Q6IQ49 451 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 SV2AQ7L0J3 742 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 TMEM25Q86YD3 366 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 SYT12Q8IV01 421 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 CRYBG2Q8N1P7 616 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 C12orf29Q8N999 325 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 TMC2Q8TDI7 906 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 CCDC47Q96A33 483 aaKnown RBP18.78■□□□□ 0.6
YIPF3-208ENST00000490447 JAKMIP2Q96AA8 810 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 KCTD10Q9H3F6 313 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
YIPF3-208ENST00000490447 HMGXB4Q9UGU5 601 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 MAP1BP46821 2468 aaKnown RBP18.78■□□□□ 0.6
YIPF3-208ENST00000490447 NEDD8-MDP1E9PL57 170 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 AP5Z1O43299 807 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 ASS1P00966 412 aaKnown RBP18.77■□□□□ 0.6
YIPF3-208ENST00000490447 CHRM1P11229 460 aaPredicted RBP18.77■□□□□ 0.6
YIPF3-208ENST00000490447 PTGER3P43115 390 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 ASPAP45381 313 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 HTR3DQ70Z44 454 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 BBS2Q9BXC9 721 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.77■□□□□ 0.6
YIPF3-208ENST00000490447 USP25Q9UHP3 1055 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 RCOR1Q9UKL0 485 aa18.77■□□□□ 0.6
YIPF3-208ENST00000490447 CDX4O14627 284 aaPredicted RBP18.76■□□□□ 0.59
YIPF3-208ENST00000490447 GIPC1O14908 333 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 HLA-DRAP01903 254 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 CEACAM1P13688 526 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 PFKFB1P16118 471 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 CSRP1P21291 193 aaKnown RBP18.76■□□□□ 0.59
YIPF3-208ENST00000490447 NTSR1P30989 418 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 VAMP7P51809 220 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 RPL6Q02878 288 aaKnown RBP18.76■□□□□ 0.59
YIPF3-208ENST00000490447 FOXC1Q12948 553 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 MAP7D1Q3KQU3 841 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 TPGS1Q6ZTW0 290 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 CHPFQ8IZ52 775 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 FRMD1Q8N878 549 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 CCDC150Q8NCX0 1101 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 WBP2Q969T9 261 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 NT5C1AQ9BXI3 368 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 CYLDQ9NQC7 956 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 MBD1Q9UIS9 605 aaPredicted RBP18.76■□□□□ 0.59
YIPF3-208ENST00000490447 SCML2Q9UQR0 700 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 PCDHA5Q9Y5H7 936 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 THADAQ6YHU6 1953 aa18.76■□□□□ 0.59
YIPF3-208ENST00000490447 ATXN2Q99700 1313 aaKnown RBP18.76■□□□□ 0.59
YIPF3-208ENST00000490447 A0A1B0GVL5 298 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 CYP26A1O43174 497 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 TBX18O95935 607 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 TYRP14679 529 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
YIPF3-208ENST00000490447 WASP42768 502 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 MAPK8P45983 427 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 ATXN3P54252 364 aaPredicted RBP18.75■□□□□ 0.59
YIPF3-208ENST00000490447 SLC36A4Q6YBV0 504 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 CLEC20AQ6ZU45 233 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 INTS8Q75QN2 995 aaKnown RBP18.75■□□□□ 0.59
YIPF3-208ENST00000490447 TADA2BQ86TJ2 420 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 CYFIP2Q96F07 1278 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 HNRNPABQ99729 332 aaKnown RBP18.75■□□□□ 0.59
YIPF3-208ENST00000490447 KLF16Q9BXK1 252 aaPredicted RBP18.75■□□□□ 0.59
YIPF3-208ENST00000490447 SLC32A1Q9H598 525 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 STARD13Q9Y3M8 1113 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 ABCA7Q8IZY2 2146 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 ASPMQ8IZT6 3477 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 NUP205Q92621 2012 aa18.75■□□□□ 0.59
YIPF3-208ENST00000490447 MAPK13O15264 365 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CACNG3O60359 315 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CFIP05156 583 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 KRT13P13646 458 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 ENGP17813 658 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 GABRG2P18507 467 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CMA1P23946 247 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 NR2F2P24468 414 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 HOXD12P35452 270 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 PGFP49763 221 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 INCA1Q0VD86 236 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 PKP1Q13835 747 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 GPRIN1Q7Z2K8 1008 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CEP76Q8TAP6 659 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CYP3A43Q9HB55 503 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 PNPLA8Q9NP80 782 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 TMEM74BQ9NUR3 256 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CALCOCO1Q9P1Z2 691 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 DNMT3LQ9UJW3 386 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 NAGPAQ9UK23 515 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 TRAF3IP3Q9Y228 551 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CEP295Q9C0D2 2601 aa18.74■□□□□ 0.59
YIPF3-208ENST00000490447 CFAP47Q6ZTR5 3102 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms