RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 CYLDQ9NQC7 956 aa9.98□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TUBGCP4Q9UGJ1 667 aa9.98□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TBK1Q9UHD2 729 aa9.98□□□□□ -0.81
RAB3GAP1-205ENST00000489858 UBQLN1Q9UMX0 589 aaKnown RBP9.98□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ZNF487B1APH4 448 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TCP11X1B4DZS4 312 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 E7ESA3 106 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 POC1B-GALNT4F8VUJ3 575 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PRPF4O43172 522 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SUN1O94901 812 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ENDOD1O94919 500 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 F2P00734 622 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 OAS1P00973 400 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CD4P01730 458 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CD48P09326 243 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SMIM10L2AP0DMW4 78 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SMIM10L2BP0DMW5 78 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 RBP3P10745 1247 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DARSP14868 501 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CREB1P16220 341 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KRT15P19012 456 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 GBP2P32456 591 aaPredicted RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SCNN1AP37088 669 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PNPLA4P41247 253 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 RGS7P49802 495 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DPYSL3Q14195 570 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FASTKD3Q14CZ7 662 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 BOLA3Q53S33 107 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DARS2Q6PI48 645 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ACOT1Q86TX2 421 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TRABD2AQ86V40 505 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CDKL3Q8IVW4 592 aaPredicted RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PDIK1LQ8N165 341 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 STK32AQ8WU08 396 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PYROXD1Q8WU10 500 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CPT1BQ92523 772 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FOXJ1Q92949 421 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ELAC2Q9BQ52 826 aaKnown RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TRABDQ9H4I3 376 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SETD4Q9NVD3 440 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CNTN3Q9P232 1028 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PAK5Q9P286 719 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 NRCAMQ92823 1304 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KAT6AQ92794 2004 aa9.97□□□□□ -0.81
RAB3GAP1-205ENST00000489858 A6NJR5 290 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 H7C0C1 242 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 APOL1O14791 398 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 MDM4O15151 490 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SNX3O60493 162 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SPAG6O75602 509 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 DNAJC8O75937 253 aaPredicted RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 RECQL4O94761 1208 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 PFKMP08237 780 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 STIP1P31948 543 aaKnown RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 PTPN9P43378 593 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SCTRP47872 440 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ATP5OP48047 213 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SLC18A1P54219 525 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 BCAT1P54687 386 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 GDF10P55107 478 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 GEMIN4P57678 1058 aaKnown RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 BASP1P80723 227 aaKnown RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 TMEM62Q0P6H9 643 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 BST2Q10589 180 aaKnown RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SPARCL1Q14515 664 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 TAF5Q15542 800 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ZBTB6Q15916 424 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 CDO1Q16878 200 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 C15orf59Q2T9L4 293 aaPredicted RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 BBS9Q3SYG4 887 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ANKRD22Q5VYY1 191 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 C9orf57Q5W0N0 161 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 OLFML1Q6UWY5 402 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 C4orf22Q6V702 233 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SPATA21Q7Z572 469 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 TTC30AQ86WT1 665 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ANKMY2Q8IV38 441 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 UNC45BQ8IWX7 931 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 C2orf69Q8N8R5 385 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 FAM71DQ8N9W8 422 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 OR6B3Q8NGW1 331 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 NPLOC4Q8TAT6 608 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 GDAP1Q8TB36 358 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 FAM172AQ8WUF8 416 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 CCT6BQ92526 530 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 GRAMD1AQ96CP6 724 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 RNF157Q96PX1 679 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 TGS1Q96RS0 853 aaKnown RBP9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SMC6Q96SB8 1091 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 OSMRQ99650 979 aa9.96□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ZNF670Q9BS34 389 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms