RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 EXOC4Q96A65 974 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 CLDN23Q96B33 292 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 OTUB2Q96DC9 234 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 DLGAP2Q9P1A6 1054 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 AJAP1Q9UKB5 411 aaPredicted RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 DAAM1Q9Y4D1 1078 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 OTOL1A6NHN0 477 aaPredicted RBP18.21■□□□□ 0.51
MDC1-206ENST00000489540 FBXO21O94952 628 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 NFATC1O95644 943 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 CAVIN2O95810 425 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 LCP1P13796 627 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 RGS7P49802 495 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 DENND1BQ6P3S1 775 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 IRGQQ8WZA9 623 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 IRF2BPLQ9H1B7 796 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 ACP6Q9NPH0 428 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 NDRG2Q9UN36 371 aaKnown RBP18.21■□□□□ 0.51
MDC1-206ENST00000489540 FHOD1Q9Y613 1164 aa18.21■□□□□ 0.51
MDC1-206ENST00000489540 NUP210Q8TEM1 1887 aaPredicted RBP18.2■□□□□ 0.5
MDC1-206ENST00000489540 CLCN1P35523 988 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 KRT9P35527 623 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
MDC1-206ENST00000489540 RPL34P49207 117 aaKnown RBP18.2■□□□□ 0.5
MDC1-206ENST00000489540 COG7P83436 770 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 UBXN1Q04323 297 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 FZD5Q13467 585 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 BSPRYQ5W0U4 402 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 BTBD8Q5XKL5 378 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 HTR3DQ70Z44 454 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 RSRC2Q7L4I2 434 aaKnown RBP18.2■□□□□ 0.5
MDC1-206ENST00000489540 ZNF687Q8N1G0 1237 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
MDC1-206ENST00000489540 RAPGEFL1Q9UHV5 662 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 NUDT5Q9UKK9 219 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 STRIP2Q9ULQ0 834 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 PCDHGC3Q9UN70 934 aa18.2■□□□□ 0.5
MDC1-206ENST00000489540 GABBR2O75899 941 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 ATP1A3P13637 1013 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 PTPN5P54829 565 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 DAOAP59103 153 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 BHLHA9Q7RTU4 235 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 APTXQ7Z2E3 356 aaKnown RBP18.19■□□□□ 0.5
MDC1-206ENST00000489540 SLC47A2Q86VL8 602 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 RNF139Q8WU17 664 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 NDRG1Q92597 394 aaKnown RBP18.19■□□□□ 0.5
MDC1-206ENST00000489540 GOLGA1Q92805 767 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 PCMTD1Q96MG8 357 aaPredicted RBP18.19■□□□□ 0.5
MDC1-206ENST00000489540 ERGIC2Q96RQ1 377 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 SLC4A5Q9BY07 1137 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 GANQ9H2C0 597 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 LHX5Q9H2C1 402 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 LMAN1LQ9HAT1 526 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 ST7Q9NRC1 585 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 ABCC13Q9NSE7 274 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 LSM7Q9UK45 103 aaKnown RBP18.19■□□□□ 0.5
MDC1-206ENST00000489540 SIK3Q9Y2K2 1263 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 DENND4CQ5VZ89 1909 aa18.19■□□□□ 0.5
MDC1-206ENST00000489540 YJEFN3A6XGL0 299 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 E7ENQ6 273 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 TRDMT1O14717 391 aaKnown RBP18.18■□□□□ 0.5
MDC1-206ENST00000489540 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
MDC1-206ENST00000489540 GJA4P35212 333 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
MDC1-206ENST00000489540 LRRC32Q14392 662 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 IQCB1Q15051 598 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 SYCP1Q15431 976 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 DGKKQ5KSL6 1271 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 TMEM110Q86TL2 294 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 MIB1Q86YT6 1006 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 FAM207AQ9NSI2 230 aaPredicted RBP18.18■□□□□ 0.5
MDC1-206ENST00000489540 F5P12259 2224 aa18.18■□□□□ 0.5
MDC1-206ENST00000489540 OBSL1O75147 1896 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 F8VZ95 297 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 MDM4O15151 490 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 ADH1CP00326 375 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 PNMA6AP0CW24 399 aaPredicted RBP18.17■□□□□ 0.5
MDC1-206ENST00000489540 IRF1P10914 325 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 CHRNB1P11230 501 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 KLK7P49862 253 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 SNX16P57768 344 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
MDC1-206ENST00000489540 TPM4P67936 248 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 PON2Q15165 354 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 DHCR24Q15392 516 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 SCUBE3Q8IX30 993 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 SYNPOQ8N3V7 929 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 PRSS33Q8NF86 280 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 NEK11Q8NG66 645 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 NOX5Q96PH1 765 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 IER2Q9BTL4 223 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 MIS12Q9H081 205 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 MARCH2Q9P0N8 246 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 RASAL2Q9UJF2 1139 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 ZNF510Q9Y2H8 683 aa18.17■□□□□ 0.5
MDC1-206ENST00000489540 CEP83Q9Y592 693 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms