RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 DMC1Q14565 340 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 HSF5Q4G112 596 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 LY6G5CQ5SRR4 150 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 NUDT18Q6ZVK8 323 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 HTR3DQ70Z44 454 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 BBS7Q8IWZ6 715 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 EZH1Q92800 747 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 KLF16Q9BXK1 252 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 SPHK2Q9NRA0 654 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 KIAA1257Q9ULG3 409 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 EP300Q09472 2414 aaPredicted RBP14.52□□□□□ -0.08
SPTLC1-207ENST00000488921 XPO1O14980 1071 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 HRO43593 1189 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 RPP40O75818 363 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 KAT7O95251 611 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 RETP07949 1114 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 SETSIPP0DME0 302 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 CCDC192P0DO97 292 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 VDRP11473 427 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 CD19P15391 556 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 GRIA2P42262 883 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 PGFP49763 221 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 MARSP56192 900 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 BST2Q10589 180 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 LRMPQ12912 555 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 LPAL2Q16609 132 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 GOLGA7BQ2TAP0 167 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 RAB41Q5JT25 222 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 PIGZQ86VD9 579 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 PPM1KQ8N3J5 372 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 USP33Q8TEY7 942 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 GAB3Q8WWW8 586 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 HHIPQ96QV1 700 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 NMUR1Q9HB89 426 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 ARHGEF4Q9NR80 690 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 OSER1Q9NX31 292 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 USP18Q9UMW8 372 aa14.52□□□□□ -0.09
SPTLC1-207ENST00000488921 DMXL1Q9Y485 3027 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 K7EQS6 105 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 AXIN1O15169 862 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 TBX18O95935 607 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 PAEPP09466 180 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 SDHBP21912 280 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 TNFRSF4P43489 277 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 SEC13P55735 322 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 COG7P83436 770 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 LMNB2Q03252 620 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 KDSRQ06136 332 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 STILQ15468 1287 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 ANO4Q32M45 955 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 C2orf27AQ580R0 203 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 C12orf40Q86WS4 652 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 TTC30AQ86WT1 665 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 TRIM59Q8IWR1 403 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 UBR7Q8N806 425 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 TSTD1Q8NFU3 115 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 XPO6Q96QU8 1125 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 LRRC4Q9HBW1 653 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 KIAA1468Q9P260 1216 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 DEC1Q9P2X7 70 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 EBF1Q9UH73 591 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 MMP17Q9ULZ9 603 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 ZNF510Q9Y2H8 683 aa14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.51□□□□□ -0.09
SPTLC1-207ENST00000488921 WDR87Q6ZQQ6 2873 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 PRR5-ARHGAP8B1AHC4 643 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 FOXD2O60548 495 aaPredicted RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 AFPP02771 609 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 SLC6A11P48066 632 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 PXNP49023 591 aaPredicted RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 TKTL1P51854 596 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 STX17P56962 302 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 ARHGAP8P85298 464 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 GCNT1Q02742 428 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 PDE4CQ08493 712 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 KCNH2Q12809 1159 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 SRSF5Q13243 272 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 TMEM270Q6UE05 265 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 RSRC2Q7L4I2 434 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 ERMP1Q7Z2K6 904 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 CACNA2D4Q7Z3S7 1137 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 TRMT11Q7Z4G4 463 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 SCD5Q86SK9 330 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 ETFBKMTQ8IXQ9 262 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 FAM160A2Q8N612 972 aaPredicted RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 LOXL4Q96JB6 756 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 SRRTQ9BXP5 876 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 DCLK3Q9C098 648 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 OLA1Q9NTK5 396 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 MARK1Q9P0L2 795 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 WDR35Q9P2L0 1181 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 RASAL2Q9UJF2 1139 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 STRIP2Q9ULQ0 834 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 PCDHB4Q9Y5E5 795 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 PLXND1Q9Y4D7 1925 aa14.5□□□□□ -0.09
SPTLC1-207ENST00000488921 DCHS1Q96JQ0 3298 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms