RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PAX3P23760 479 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 CD27P26842 260 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 RBMS1P29558 406 aaKnown RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 INHBCP55103 352 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 USP46P62068 366 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 CCDC142Q17RM4 750 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 RNF20Q5VTR2 975 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 JADE1Q6IE81 842 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 SPATA2LQ8IUW3 424 aaPredicted RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 BBS7Q8IWZ6 715 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 CCDC97Q96F63 343 aaPredicted RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 CCNL2Q96S94 520 aaPredicted RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 SEMA3CQ99985 751 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 HAPLN2Q9GZV7 340 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 ANO2Q9NQ90 1003 aa13□□□□□ -0.33
ATPAF1-205ENST00000487193 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 GTF3C5Q9Y5Q8 519 aaPredicted RBP13□□□□□ -0.33
ATPAF1-205ENST00000487193 ZNF840PA6NDX5 716 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 NEDD8-MDP1E9PL57 170 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 SLC16A4O15374 487 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 IGLV3-19P01714 112 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 ACP1P24666 158 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 CLN3Q13286 438 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 NCAPHQ15003 741 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 C3orf38Q5JPI3 329 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 OTUB2Q96DC9 234 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 DEPDC7Q96QD5 511 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 XPO6Q96QU8 1125 aaKnown RBP12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 TRIM9Q9C026 710 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 ZNF768Q9H5H4 540 aaKnown RBP12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 ABCB6Q9NP58 842 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 SATB2Q9UPW6 733 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
ATPAF1-205ENST00000487193 PLXNA2O75051 1894 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 VILLO15195 856 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 DEXIO95424 95 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 TAF6P49848 677 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 COPAP53621 1224 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 MCL1Q07820 350 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 STRN3Q13033 797 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 TPGS1Q6ZTW0 290 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 LEO1Q8WVC0 666 aaPredicted RBP12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 OSBPL2Q9H1P3 480 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 MYH10P35580 1976 aa12.98□□□□□ -0.33
ATPAF1-205ENST00000487193 TSPAN3O60637 253 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 GJB6O95452 261 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SEMA4FO95754 770 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 OAS1P00973 400 aaKnown RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 WNT1P04628 370 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 ITGB2P05107 769 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 IRF1P10914 325 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 TYRP14679 529 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 EPHA8P29322 1005 aaPredicted RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 DGKGP49619 791 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 MYL7Q01449 175 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 INTS6LQ5JSJ4 861 aaKnown RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 ZNF787Q6DD87 383 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 FOXR1Q6PIV2 292 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SRRM1Q8IYB3 904 aaKnown RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 WBP2Q969T9 261 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SGF29Q96ES7 293 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SLC6A18Q96N87 628 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SLC46A1Q96NT5 459 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 BBS2Q9BXC9 721 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
ATPAF1-205ENST00000487193 SFI1A8K8P3 1242 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 KPNA7A9QM74 516 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 OLFM2O95897 454 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 BCAT1P54687 386 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 SKOR1P84550 965 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 CDCP2Q5VXM1 449 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 DENND5BQ6ZUT9 1274 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 BHMTQ93088 406 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 SKA1Q96BD8 255 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 ACBD6Q9BR61 282 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 ORAI3Q9BRQ5 295 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 LRWD1Q9UFC0 647 aa12.96□□□□□ -0.33
ATPAF1-205ENST00000487193 LRBAP50851 2863 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 HCRTO43612 131 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 OPA1O60313 960 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 CACNG3O60359 315 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 HIP1RO75146 1068 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 ARRB1P49407 418 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms