RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 TTC9BQ8N6N2 239 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 KREMEN2Q8NCW0 462 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 GIPC2Q8TF65 315 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 NDRG1Q92597 394 aaKnown RBP13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 MYRFLQ96LU7 910 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 CFAP57Q96MR6 1250 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 CDK5RAP1Q96SZ6 601 aaKnown RBP13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 TBCBQ99426 244 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 NPY6RQ99463 290 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 TLR8Q9NR97 1041 aaKnown RBP13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 OLA1Q9NTK5 396 aaKnown RBP13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 YIPF1Q9Y548 306 aa13.86□□□□□ -0.19
VTI1BP1-201ENST00000486325 PRPSAP2O60256 369 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 LRCH4O75427 683 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 SOAT2O75908 522 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 ZRANB2O95218 330 aaKnown RBP eCLIP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 LRG1P02750 347 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 FYNP06241 537 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 ATF6P18850 670 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 ATP11AP98196 1134 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 IFRD2Q12894 506 aaPredicted RBP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 TAF10Q12962 218 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 SND1Q7KZF4 910 aaKnown RBP eCLIP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 TADA2BQ86TJ2 420 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 RCOR2Q8IZ40 523 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 ELMOD1Q8N336 334 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 FAM172AQ8WUF8 416 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 PGAP3Q96FM1 320 aaPredicted RBP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 TRMT2BQ96GJ1 504 aaKnown RBP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 NAP1L3Q99457 506 aaPredicted RBP13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 FBXW11Q9UKB1 542 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 USP18Q9UMW8 372 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
VTI1BP1-201ENST00000486325 HIDE1A8MVS5 230 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 M0QYT0 321 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TRUB2O95900 331 aaKnown RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 MIPP30301 263 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 SULT1E1P49888 294 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 CLCN4P51793 760 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 AIF1P55008 147 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 COPS2P61201 443 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TWF1Q12792 350 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 CAMK1Q14012 370 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 PTPROQ16827 1216 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 C15orf59Q2T9L4 293 aaPredicted RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 CCDC181Q5TID7 509 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 SYPL2Q5VXT5 272 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TRNP1Q6NT89 227 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 HFE2Q6ZVN8 426 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 DNAJB7Q7Z6W7 309 aaPredicted RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 PSTKQ8IV42 348 aaKnown RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 CEP112Q8N8E3 955 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 STKLD1Q8NE28 680 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 RBM41Q96IZ5 413 aaKnown RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 ZNF512Q96ME7 567 aaPredicted RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 TTC7AQ9ULT0 858 aaPredicted RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 MAGED2Q9UNF1 606 aaPredicted RBP13.84□□□□□ -0.19
VTI1BP1-201ENST00000486325 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 A0A1W2PPC1 479 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 A0A1W2PQH9 124 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 CEP104O60308 925 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 RDXP35241 583 aaKnown RBP13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 DNA2P51530 1060 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 KPNA1P52294 538 aaPredicted RBP13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 TAS2R40P59535 323 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 USP46P62068 366 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 TUBB4BP68371 445 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 DEUP1Q05D60 604 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 CDO1Q16878 200 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ARL13BQ3SXY8 428 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 SNX30Q5VWJ9 437 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 SCYL2Q6P3W7 929 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 RSRC2Q7L4I2 434 aaKnown RBP13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 BNIPLQ7Z465 357 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 MAP7D3Q8IWC1 876 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
VTI1BP1-201ENST00000486325 ARFGAP1Q8N6T3 406 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms