RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TULP3O75386 442 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 TOM1L1O75674 476 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 OLFM2O95897 454 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 ADRB2P07550 413 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 HMGB1P09429 215 aaKnown RBP8.85□□□□□ -0.99
XRN1-212ENST00000486211 C1SP09871 688 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CDK4P11802 303 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CR2P20023 1033 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 PAX3P23760 479 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CYP2F1P24903 491 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 TXKP42681 527 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CCR10P46092 362 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 ACADVLP49748 655 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CCT8P50990 548 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 SLC7A9P82251 487 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 MCL1Q07820 350 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 VAC14Q08AM6 782 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 DNAJC3Q13217 504 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 UBAP2LQ14157 1087 aaKnown RBP8.85□□□□□ -0.99
XRN1-212ENST00000486211 KRT32Q14532 448 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 KCNT1Q5JUK3 1230 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 LY6G5CQ5SRR4 150 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 BROXQ5VW32 411 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 WSCD1Q658N2 575 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 KIAA1324Q6UXG2 1013 aaKnown RBP8.85□□□□□ -0.99
XRN1-212ENST00000486211 DCP1BQ8IZD4 617 aaKnown RBP8.85□□□□□ -0.99
XRN1-212ENST00000486211 DAW1Q8N136 415 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 EXD3Q8N9H8 876 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 LEO1Q8WVC0 666 aaPredicted RBP8.85□□□□□ -0.99
XRN1-212ENST00000486211 IGSF8Q969P0 613 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 MTMR9Q96QG7 549 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 PKMYT1Q99640 499 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 RNF38Q9H0F5 515 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 HSPBP1Q9NZL4 362 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 ANKRD6Q9Y2G4 727 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 RELNP78509 3460 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 LRRK2Q5S007 2527 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 SCN1AP35498 2009 aa8.85□□□□□ -0.99
XRN1-212ENST00000486211 CLEC18AA5D8T8 446 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CYB561D2O14569 222 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 SLC9A3R1O14745 358 aaPredicted RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 HOXC11O43248 304 aaPredicted RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 TRAK2O60296 914 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 FAM189A1O60320 539 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 IGLV3-19P01714 112 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CLTAP09496 248 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 PFKLP17858 780 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 PDE6CP51160 858 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 AFF3P51826 1226 aaKnown RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 PEX3P56589 373 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 PCBP4P57723 403 aaKnown RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 RPL10AP62906 217 aaKnown RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 IL9RQ01113 521 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 SERINC3Q13530 473 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 ENOX2Q16206 610 aaKnown RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 CCDC142Q17RM4 750 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 LAYNQ6UX15 382 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CLEC18BQ6UXF7 455 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CHPFQ8IZ52 775 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CACTIN-AS1Q8N1I8 211 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 THEM5Q8N1Q8 247 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 NAT16Q8N8M0 369 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 FSIP1Q8NA03 581 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CLEC18CQ8NCF0 446 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 RFFLQ8WZ73 363 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 CCSER1Q9C0I3 900 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 ABCB6Q9NP58 842 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 ITM2CQ9NQX7 267 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 GJB4Q9NTQ9 266 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 HEMK1Q9Y5R4 338 aaPredicted RBP8.84□□□□□ -0.99
XRN1-212ENST00000486211 CPQQ9Y646 472 aa8.84□□□□□ -0.99
XRN1-212ENST00000486211 USP9YO00507 2555 aaPredicted RBP8.83□□□□□ -1
XRN1-212ENST00000486211 ENO4A6NNW6 628 aa8.83□□□□□ -1
XRN1-212ENST00000486211 SUV39H1O43463 412 aa8.83□□□□□ -1
XRN1-212ENST00000486211 XPOTO43592 962 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 AFPP02771 609 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 VSIG8P0DPA2 414 aa8.83□□□□□ -1
XRN1-212ENST00000486211 BMP2P12643 396 aa8.83□□□□□ -1
XRN1-212ENST00000486211 RPA1P27694 616 aa8.83□□□□□ -1
XRN1-212ENST00000486211 CTSKP43235 329 aa8.83□□□□□ -1
XRN1-212ENST00000486211 GRIA4P48058 902 aa8.83□□□□□ -1
XRN1-212ENST00000486211 TPMTP51580 245 aa8.83□□□□□ -1
XRN1-212ENST00000486211 NFKB2Q00653 900 aa8.83□□□□□ -1
XRN1-212ENST00000486211 GAD2Q05329 585 aa8.83□□□□□ -1
XRN1-212ENST00000486211 MAPK7Q13164 816 aa8.83□□□□□ -1
XRN1-212ENST00000486211 ECM1Q16610 540 aa8.83□□□□□ -1
XRN1-212ENST00000486211 NFE2Q16621 373 aaPredicted RBP8.83□□□□□ -1
XRN1-212ENST00000486211 INAVAQ3KP66 663 aa8.83□□□□□ -1
XRN1-212ENST00000486211 C4orf17Q53FE4 359 aa8.83□□□□□ -1
XRN1-212ENST00000486211 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
XRN1-212ENST00000486211 METTL23Q86XA0 190 aa8.83□□□□□ -1
XRN1-212ENST00000486211 DHX40Q8IX18 779 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 DCBLD1Q8N8Z6 715 aa8.83□□□□□ -1
XRN1-212ENST00000486211 CNDP2Q96KP4 475 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms