RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 DCLK1O15075 740 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 KIAA0391O15091 583 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 LDHAP00338 332 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 CSH1P0DML2 217 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 CSH2P0DML3 217 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 ANXA13P27216 316 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 PNPLA4P41247 253 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 CYP2J2P51589 502 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 MYL7Q01449 175 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 GOLGA8FQ08AF8 430 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 GOLGA8DPQ0D2H9 430 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 MTF1Q14872 753 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 SF3A2Q15428 464 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 ZNF77Q15935 545 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 NFE2Q16621 373 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 LAIR1Q6GTX8 287 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 TRAPPC11Q7Z392 1133 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 FAM186BQ8IYM0 893 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 TOP6BLQ8N6T0 577 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 MRPS31Q92665 395 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 CCDC127Q96BQ5 260 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 HHIPQ96QV1 700 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 RNF38Q9H0F5 515 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 ARRDC1-AS1Q9H2J1 176 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 MMRN2Q9H8L6 949 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 AGPAT3Q9NRZ7 376 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 EPN1Q9Y6I3 576 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 KIAA1549LQ6ZVL6 1849 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 SSU72P8A0A1W2PR75 194 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 ZNF233A6NK53 670 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 EIF3CLB5ME19 914 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 DYNC1I1O14576 645 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 PMM2O15305 246 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 P4HA2O15460 535 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 KIF5CO60282 957 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 NDUFA10O95299 355 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 PAPSS2O95340 614 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 RETP07949 1114 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 DLATP10515 647 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 GRIK1P39086 918 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 CDH8P55286 799 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 SMARCB1Q12824 385 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 IFRD2Q12894 506 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 GAB4Q2WGN9 574 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 EML3Q32P44 896 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 RAD9BQ6WBX8 426 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 GBP6Q6ZN66 633 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 PRR23CQ6ZRP0 262 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 TOGARAM2Q6ZUX3 1019 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 INTS8Q75QN2 995 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 WDR5BQ86VZ2 330 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 TMEM86AQ8N2M4 240 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 EHBP1Q8NDI1 1231 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 SH3RF2Q8TEC5 729 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 EEF2KMTQ96G04 330 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 MSANTD3Q96H12 275 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 PCED1BQ96HM7 432 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 ANKRD36BP1Q96IX9 119 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 MYRFLQ96LU7 910 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 MMS19Q96T76 1030 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 EIF3CQ99613 913 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 IER2Q9BTL4 223 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 HAUS4Q9H6D7 363 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 ECT2Q9H8V3 914 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 ZDHHC4Q9NPG8 344 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 LUC7LQ9NQ29 371 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 DUS2Q9NX74 493 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 CDV3Q9UKY7 258 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 RAB23Q9ULC3 237 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 BZW2Q9Y6E2 419 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 MYOFQ9NZM1 2061 aa9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 HELZP42694 1942 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-208ENST00000486159 F8VP50 259 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 RNF225M0QZC1 329 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 AKAP3O75969 853 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TNNC2P02585 160 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CKMP06732 381 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 KRT13P13646 458 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 HNRNPLP14866 589 aaKnown RBP eCLIP9.93□□□□□ -0.823e-9■■■□□ 16.8
TMEM39A-208ENST00000486159 HDCP19113 662 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 DDX6P26196 483 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 RAP1GAPP47736 663 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SLC6A11P48066 632 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 LHX1P48742 406 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 PGFP49763 221 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SEC13P55735 322 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 MYL6P60660 151 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 RPL10AP62906 217 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CYP24A1Q07973 514 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CETN1Q12798 172 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms