RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 USP33Q8TEY7 942 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 SPHK2Q9NRA0 654 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 NUDT5Q9UKK9 219 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 TSPAN16Q9UKR8 245 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 EP300Q09472 2414 aaPredicted RBP19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 KAT7O95251 611 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 FGFR1OPO95684 399 aaKnown RBP19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 APODP05090 189 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 CD19P15391 556 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 DMC1Q14565 340 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 LPAL2Q16609 132 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 GOLGA7BQ2TAP0 167 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 BTBD8Q5XKL5 378 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 C12orf40Q86WS4 652 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 TMEM25Q86YD3 366 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 ARHGAP18Q8N392 663 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 EHBP1Q8NDI1 1231 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 CDK5RAP1Q96SZ6 601 aaKnown RBP19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 HESX1Q9UBX0 185 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 LSM7Q9UK45 103 aaKnown RBP19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 GPR179Q6PRD1 2367 aa19.36■□□□□ 0.69
PRPF40A-209ENST00000486100 GVINP1Q7Z2Y8 2422 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 XPO1O14980 1071 aaKnown RBP19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 MDM4O15151 490 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 HOXC11O43248 304 aaPredicted RBP19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 RETP07949 1114 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 PAEPP09466 180 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 GRIA2P42262 883 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 TKTL1P51854 596 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 BCAT1P54687 386 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 SEC13P55735 322 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 MRPS21P82921 87 aaKnown RBP19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 PDE4CQ08493 712 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 C2orf27AQ580R0 203 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 PM20D1Q6GTS8 502 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 TMEM270Q6UE05 265 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 CEP68Q76N32 757 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 ETFBKMTQ8IXQ9 262 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 PPM1KQ8N3J5 372 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 ARHGEF4Q9NR80 690 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 RWDD2AQ9UIY3 292 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 PCDHB4Q9Y5E5 795 aa19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRPF40A-209ENST00000486100 OTOGLQ3ZCN5 2332 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 HELZP42694 1942 aaKnown RBP19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 ANTXRLA6NF34 631 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 TULP2O00295 520 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 O00370 1275 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 ZBED1O96006 694 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 AFPP02771 609 aaKnown RBP19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 CCDC192P0DO97 292 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 TNFRSF4P43489 277 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 ID4P47928 161 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 COG7P83436 770 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 MESP2Q0VG99 397 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 BST2Q10589 180 aaKnown RBP19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 ANO4Q32M45 955 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 PREPLQ4J6C6 727 aaPredicted RBP19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 PHTF2Q8N3S3 785 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 NAT16Q8N8M0 369 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 GAB3Q8WWW8 586 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 HHIPQ96QV1 700 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 DEC1Q9P2X7 70 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 EBF1Q9UH73 591 aa19.34■□□□□ 0.69
PRPF40A-209ENST00000486100 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 AXIN1O15169 862 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 TULP3O75386 442 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 APBB3O95704 486 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 TGM1P22735 817 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 YWHAGP61981 247 aaKnown RBP eCLIP19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 GCNT1Q02742 428 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 LCLAT1Q6UWP7 414 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 Q6ZNB5 142 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 RRAGAQ7L523 313 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 MIB1Q86YT6 1006 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 SFTPA1Q8IWL2 248 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 UBA3Q8TBC4 463 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 KCTD13Q8WZ19 329 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 TFAP2BQ92481 460 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 KAT5Q92993 513 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 LRRC4Q9HBW1 653 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 WDR35Q9P2L0 1181 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 MMP17Q9ULZ9 603 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 WDR87Q6ZQQ6 2873 aa19.33■□□□□ 0.68
PRPF40A-209ENST00000486100 ZNF292O60281 2723 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 TBC1D3BA6NDS4 549 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 RPP40O75818 363 aaKnown RBP19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 STC2O76061 302 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 SETSIPP0DME0 302 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 KDSRQ06136 332 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 EFEMP1Q12805 493 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 CNGA2Q16280 664 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 HSF5Q4G112 596 aaPredicted RBP19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 PKDCCQ504Y2 493 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 EMC10Q5UCC4 262 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 NUDT18Q6ZVK8 323 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 CACNA2D4Q7Z3S7 1137 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms