RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 NT5C1AQ9BXI3 368 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 SMYD3Q9H7B4 428 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 MMRN2Q9H8L6 949 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CRTAC1Q9NQ79 661 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 ANO10Q9NW15 660 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 GCNT4Q9P109 453 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CACNA1GO43497 2377 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 GTPBP10A4D1E9 387 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 K7EQS6 105 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 SCAMP3O14828 347 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CILPO75339 1184 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 NFATC1O95644 943 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 ABL1P00519 1130 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 PDGFRBP09619 1106 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 PFKLP17858 780 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CSRP1P21291 193 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 EEF1GP26641 437 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 ANXA13P27216 316 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 OPRD1P41143 372 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 MAPK8P45983 427 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CYP27A1Q02318 531 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 KCNH2Q12809 1159 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CRY1Q16526 586 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 STX1AQ16623 288 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 RASSF3Q86WH2 238 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 TMEFF1Q8IYR6 380 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 PGBD3Q8N328 593 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 FRMD1Q8N878 549 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 KDF1Q8NAX2 398 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 SEMA4DQ92854 862 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 SMARCD1Q96GM5 515 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CNOT6LQ96LI5 555 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF4-213ENST00000484112 KIAA1257Q9ULG3 409 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 CHD8Q9HCK8 2581 aa10.57□□□□□ -0.72
CPSF4-213ENST00000484112 LEFTY2O00292 366 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ATP2C2O75185 946 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ALDH1A2O94788 518 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 TIE1P35590 1138 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 GRIK1P39086 918 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 SLC6A11P48066 632 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 PDE6CP51160 858 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 NDST1P52848 882 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 CDH8P55286 799 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 PSMC1P62191 440 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 GCNT1Q02742 428 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 CUL2Q13617 745 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 MDH1BQ5I0G3 518 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 SPOPLQ6IQ16 392 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 SCARA5Q6ZMJ2 495 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 DENND5BQ6ZUT9 1274 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 LPCAT2Q7L5N7 544 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ENOSF1Q7L5Y1 443 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 TXNDC5Q8NBS9 432 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 NT5C1BQ96P26 610 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 MED15Q96RN5 788 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 HNRNPABQ99729 332 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 NUSAP1Q9BXS6 441 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 NAT10Q9H0A0 1025 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 SDCBP2Q9H190 292 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 SLC32A1Q9H598 525 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 PNPLA8Q9NP80 782 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ZDHHC4Q9NPG8 344 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 TRPM5Q9NZQ8 1165 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 MMP17Q9ULZ9 603 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ARHGAP26Q9UNA1 814 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 WASF3Q9UPY6 502 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 NME7Q9Y5B8 376 aa10.56□□□□□ -0.72
CPSF4-213ENST00000484112 ATXN2Q99700 1313 aaKnown RBP10.56□□□□□ -0.72
CPSF4-213ENST00000484112 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 RTN3O95197 1032 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 HNRNPLP14866 589 aaKnown RBP eCLIP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 BDNFP23560 247 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 PTGER3P43115 390 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 MRPS21P82921 87 aaKnown RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 ZXDBP98169 803 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 LMAN2Q12907 356 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 MAN2A1Q16706 1144 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 EMC10Q5UCC4 262 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 IRF2BP1Q8IU81 584 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 SFTPA1Q8IWL2 248 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 DEFB119Q8N690 84 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms