RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GTF3C4Q9UKN8 822 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NUMBLQ9Y6R0 609 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NUP210Q8TEM1 1887 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZDBF2Q9HCK1 2354 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF638Q14966 1978 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TARSL2A2RTX5 802 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MIF4GDA9UHW6 222 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 THAP12O43422 761 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MED7O43513 233 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CEP104O60308 925 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MOSPD3O75425 235 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 OAZ2O95190 189 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 H2AFXP16104 143 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CHRNB2P17787 502 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TYMPP19971 482 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CXCR5P32302 372 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ELF1P32519 619 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CDH8P55286 799 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TNNC1P63316 161 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RBP5P82980 135 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CYP4F8P98187 520 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PLD1Q13393 1074 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CLEC16AQ2KHT3 1053 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SOWAHAQ2M3V2 549 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MGAT5BQ3V5L5 792 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM259Q4ZIN3 620 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 GLE1Q53GS7 698 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PRSS36Q5K4E3 855 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 C11orf63Q6NUN7 778 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TRIM67Q6ZTA4 783 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SLFN11Q7Z7L1 901 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 GPR65Q8IYL9 337 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ADGRF2Q8IZF7 708 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SPATA4Q8NEY3 305 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 COG1Q8WTW3 980 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 DDX1Q92499 740 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RUBCNQ92622 972 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 EDAQ92838 391 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ASIC4Q96FT7 647 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 HPDLQ96IR7 371 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZSWIM3Q96MP5 696 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TSPAN18Q96SJ8 248 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PLA2G2FQ9BZM2 168 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF518BQ9C0D4 1074 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZCWPW1Q9H0M4 648 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SDCBP2Q9H190 292 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 FAM124BQ9H5Z6 455 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SMYD3Q9H7B4 428 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MRPL47Q9HD33 250 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 OSGEPQ9NPF4 335 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 DDX43Q9NXZ2 648 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TAS2R14Q9NYV8 317 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NXF1Q9UBU9 619 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CNOT8Q9UFF9 292 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 HMGXB4Q9UGU5 601 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 AFF4Q9UHB7 1163 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ITGA11Q9UKX5 1188 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CNTN6Q9UQ52 1028 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ANAPC1Q9H1A4 1944 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 GOLGA6L10A0A0M3HER8 536 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 A0A1W2PRU2 124 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ARHGEF37A1IGU5 675 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 MYBPHLA2RUH7 354 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM221A6NGB7 291 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 M0R296 226 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 PGRMC1O00264 195 aaKnown RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ATP8B1O43520 1251 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 BUB1BO60566 1050 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 XYLBO75191 536 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 MTA2O94776 668 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 LSM8O95777 96 aaKnown RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CYP11A1P05108 521 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CYP1A2P05177 515 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 PDGFRBP09619 1106 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 HNRNPA1P09651 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 UNGP13051 313 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 LAMP2P13473 410 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ALADP13716 330 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CD58P19256 250 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ACO1P21399 889 aaKnown RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CYP2F1P24903 491 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CACNA2D1P54289 1103 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 MYO1EQ12965 1108 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 GPR17Q13304 367 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 HTR4Q13639 388 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 GRM2Q14416 872 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 TEAD2Q15562 447 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 PPP2R5EQ16537 467 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 C8orf74Q6P047 294 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 OTOP3Q7RTS5 596 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 NT5DC3Q86UY8 548 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 DNAAF5Q86Y56 855 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 TMC8Q8IU68 726 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 TCEAL8Q8IYN2 117 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ZDHHC14Q8IZN3 488 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 MMGT1Q8N4V1 131 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM35BQ8NCS4 154 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms