RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CSDE1O75534 798 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SNRPA1P09661 255 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PSMC3P17980 439 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CCNCP24863 283 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 HPCAL1P37235 193 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 MARCKSL1P49006 195 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 GALCP54803 685 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 GALK2Q01415 458 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 DNASE1L3Q13609 305 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 LRIT3Q3SXY7 679 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PGM2L1Q6PCE3 622 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 C4orf32Q8N8J7 132 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 DOK1Q99704 481 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CCDC77Q9BR77 488 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ZKSCAN3Q9BRR0 538 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SLC38A10Q9HBR0 1119 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 COL16A1Q07092 1604 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 NHSL1Q5SYE7 1610 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 BAZ2BQ9UIF8 2168 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ARHGEF35A5YM69 484 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 TGDSO95455 350 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 STARD3NLO95772 234 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 HOXB7P09629 217 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 TGM1P22735 817 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 IVDP26440 423 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 IDUAP35475 653 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SLC26A2P50443 739 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ITGA8P53708 1063 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 MLLT10P55197 1068 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ARHGAP8P85298 464 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 GNA13Q14344 377 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CARTPTQ16568 116 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 TCHHL1Q5QJ38 904 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PXDC1Q5TGL8 231 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 IDO2Q6ZQW0 420 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 FAM196AQ6ZSG2 479 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 UTS2BQ765I0 119 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 FAM89AQ96GI7 184 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 METTL2AQ96IZ6 378 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 INO80BQ9C086 356 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 NAA50Q9GZZ1 169 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 OLAHQ9NV23 265 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 NOSIPQ9Y314 301 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ALS2Q96Q42 1657 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 EXOC1LA0A1B0GW35 172 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 E5RJQ4 531 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 POLR1CO15160 346 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SLC22A1O15245 554 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ALOX5P09917 674 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ICAM2P13598 275 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF182P17025 639 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 HSPA6P17066 643 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 RPL10P27635 214 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CYP1B1Q16678 543 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 IGSF11Q5DX21 431 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 FAM182AQ5T1J6 154 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 FAM205BPQ63HN1 556 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 LYPD8Q6UX82 237 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SNX29P2Q8IUI4 249 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ACDQ96AP0 544 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 CCDC106Q9BWC9 280 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 PSMD13Q9UNM6 376 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 APOBEC2Q9Y235 224 aaKnown RBP8.1□□□□□ -1.11
COL4A5-205ENST00000483338 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 TRIM64BA6NI03 449 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 GPC4O75487 556 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 APBA3O96018 575 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 ERBB2P04626 1255 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 CAPN1P07384 714 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 ACTN1P12814 892 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 KRT10P13645 584 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 KRT17Q04695 432 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 RARS2Q5T160 578 aaKnown RBP8.09□□□□□ -1.11
COL4A5-205ENST00000483338 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 DGLUCYQ7Z3D6 616 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 AKAP14Q86UN6 197 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 HPS6Q86YV9 775 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 TRIB2Q92519 343 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 C1orf74Q96LT6 269 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 CFAP57Q96MR6 1250 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF717Q9BY31 904 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-205ENST00000483338 FRMD8Q9BZ67 464 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-205ENST00000483338 MTMR12Q9C0I1 747 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-205ENST00000483338 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-205ENST00000483338 CDH22Q9UJ99 828 aa8.09□□□□□ -1.11
COL4A5-205ENST00000483338 VANGL2Q9ULK5 521 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms