RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 PLXND1Q9Y4D7 1925 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 ZNF840PA6NDX5 716 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 TNFRSF10BO14763 440 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 GABRDO14764 452 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 PRPF6O94906 941 aaKnown RBP11.45□□□□□ -0.58
CCDC58-205ENST00000479899 BMP15O95972 392 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 TNNC2P02585 160 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 IRF1P10914 325 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 GAP43P17677 238 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 SLC7A9P82251 487 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
CCDC58-205ENST00000479899 TAF10Q12962 218 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 CBLBQ13191 982 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 MAP7D1Q3KQU3 841 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 VSTM1Q6UX27 236 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 GPD1LQ8N335 351 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 OR5B17Q8NGF7 314 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 CXorf38Q8TB03 319 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 PCED1BQ96HM7 432 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 TMX3Q96JJ7 454 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 SPATA17Q96L03 361 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 MRPL45Q9BRJ2 306 aaKnown RBP11.45□□□□□ -0.58
CCDC58-205ENST00000479899 STK17AQ9UEE5 414 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 SMC3Q9UQE7 1217 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 PCDHB11Q9Y5F2 797 aa11.45□□□□□ -0.58
CCDC58-205ENST00000479899 VPS37CA5D8V6 355 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SLC9A3R1O14745 358 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 ADAM23O75077 832 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 HOXB2P14652 356 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 GARTP22102 1010 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 CACNA2D1P54289 1103 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 FAM193AP78312 1265 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 GFPT1Q06210 699 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 MAPRE1Q15691 268 aaKnown RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 LY6G5CQ5SRR4 150 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 TDRD10Q5VZ19 366 aaKnown RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 LARP1BQ659C4 914 aaKnown RBP11.44□□□□□ -0.58
CCDC58-205ENST00000479899 RHBDF2Q6PJF5 856 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SV2BQ7L1I2 683 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 CHCHD4Q8N4Q1 142 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 MINDY1Q8N5J2 469 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 OR6B3Q8NGW1 331 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SLITRK1Q96PX8 696 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 STRA6Q9BX79 667 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SNX25Q9H3E2 840 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 DPEP3Q9H4B8 488 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SEL1LQ9UBV2 794 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 SH3BP1Q9Y3L3 701 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 MYOFQ9NZM1 2061 aa11.44□□□□□ -0.58
CCDC58-205ENST00000479899 LOC400499M0QZD8 3231 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 TBC1D3BA6NDS4 549 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 AP5Z1O43299 807 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 OPHN1O60890 802 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 OLFM2O95897 454 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 OAS1P00973 400 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 WARSP23381 471 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 TXLNAP40222 546 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 GRIA2P42262 883 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 KIR2DL1P43626 348 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 CEBPZQ03701 1054 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 GAD2Q05329 585 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 SEMA3BQ13214 749 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 BYSLQ13895 437 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 RABEP1Q15276 862 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 DUOXA1Q1HG43 343 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 ANO4Q32M45 955 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 C10orf76Q5T2E6 689 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 BTBD8Q5XKL5 378 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 SLC23A3Q6PIS1 610 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 DDX42Q86XP3 938 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 ADGRG2Q8IZP9 1017 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 MYCBPAPQ8TBZ2 947 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 FBXO32Q969P5 355 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 CLIC6Q96NY7 704 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 EHD2Q9NZN4 543 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 GMPR2Q9P2T1 348 aaKnown RBP11.43□□□□□ -0.58
CCDC58-205ENST00000479899 PILRBQ9UKJ0 227 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 SLC6A14Q9UN76 642 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 NME7Q9Y5B8 376 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 ZFYVE26Q68DK2 2539 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 PCDH15Q96QU1 1955 aa11.43□□□□□ -0.58
CCDC58-205ENST00000479899 ASCC3Q8N3C0 2202 aaKnown RBP11.42□□□□□ -0.58
CCDC58-205ENST00000479899 CLDN5O00501 218 aa11.42□□□□□ -0.58
CCDC58-205ENST00000479899 TRIM24O15164 1050 aa11.42□□□□□ -0.58
CCDC58-205ENST00000479899 DLATP10515 647 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms