RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 NUP62CLQ9H1M0 184 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 SIX2Q9NPC8 291 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 ACP6Q9NPH0 428 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 HCN2Q9UL51 889 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 PCDHB4Q9Y5E5 795 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 SPAG17Q6Q759 2223 aa19.75■□□□□ 0.75
SREBF1-212ENST00000478616 BECN2A8MW95 431 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 CHURC1-FNTBB4DL54 471 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 KLKB1P03952 638 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 PAEPP09466 180 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 IRF1P10914 325 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 PLA2G4AP47712 749 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 MIIPQ5JXC2 388 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 HTR3DQ70Z44 454 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 ETFBKMTQ8IXQ9 262 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 RBBP8NLQ8NC74 664 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-212ENST00000478616 SLC35F5Q8WV83 523 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 CLIC5Q9NZA1 410 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.74■□□□□ 0.75
SREBF1-212ENST00000478616 PCDHGA2Q9Y5H1 932 aa19.74■□□□□ 0.75
SREBF1-212ENST00000478616 TRIM24O15164 1050 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 CCDC192P0DO97 292 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 CD19P15391 556 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 DRD1P21728 446 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 FNTBP49356 437 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 TKTL1P51854 596 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 BCAT1P54687 386 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 GRSF1Q12849 480 aaKnown RBP eCLIP19.73■□□□□ 0.75
SREBF1-212ENST00000478616 SRSF5Q13243 272 aaKnown RBP19.73■□□□□ 0.75
SREBF1-212ENST00000478616 PMF1Q6P1K2 205 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 DDX42Q86XP3 938 aaKnown RBP eCLIP19.73■□□□□ 0.75
SREBF1-212ENST00000478616 TMEM25Q86YD3 366 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 NAGPAQ9UK23 515 aa19.73■□□□□ 0.75
SREBF1-212ENST00000478616 HRO43593 1189 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 STC2O76061 302 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 LMNAP02545 664 aaKnown RBP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 HNRNPLP14866 589 aaKnown RBP eCLIP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 ATP5C1P36542 298 aaKnown RBP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 YWHAEP62258 255 aaKnown RBP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 ADIGQ0VDE8 80 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 BST2Q10589 180 aaKnown RBP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 CNGA2Q16280 664 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 TRIM65Q6PJ69 517 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 KCTD13Q8WZ19 329 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 SECISBP2LQ93073 1101 aaKnown RBP19.72■□□□□ 0.75
SREBF1-212ENST00000478616 EPC1Q9H2F5 836 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 DCHS1Q96JQ0 3298 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 SDK1Q7Z5N4 2213 aa19.72■□□□□ 0.75
SREBF1-212ENST00000478616 A0A0A0MRY4 1105 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 YJEFN3A6XGL0 299 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 E7ENQ6 273 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 SLC9A3R1O14745 358 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-212ENST00000478616 PON1P27169 355 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 HOXA6P31267 233 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 RPL34P49207 117 aaKnown RBP19.71■□□□□ 0.75
SREBF1-212ENST00000478616 DCLK2Q8N568 766 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 USP33Q8TEY7 942 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 CLEC4CQ8WTT0 213 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 SEMA4AQ9H3S1 761 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 SAMSN1Q9NSI8 373 aaKnown RBP19.71■□□□□ 0.75
SREBF1-212ENST00000478616 CYTH4Q9UIA0 394 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 KIAA1257Q9ULG3 409 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 DMXL1Q9Y485 3027 aa19.71■□□□□ 0.75
SREBF1-212ENST00000478616 CEP250Q9BV73 2442 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 PIK3R2O00459 728 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 HOXC11O43248 304 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 ZBED1O96006 694 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 ADH5P11766 374 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 TRIM21P19474 475 aaKnown RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 PXNP49023 591 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 PSEN1P49768 467 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 RGS7P49802 495 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 DAOAP59103 153 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 YWHAGP61981 247 aaKnown RBP eCLIP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 KCNMA1Q12791 1236 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 HSP90AA4PQ58FG1 418 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 C10orf120Q5SQS8 335 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 EMC10Q5UCC4 262 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 RPLP0P6Q8NHW5 317 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 OTUB2Q96DC9 234 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 IPO9Q96P70 1041 aaKnown RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 FAM126AQ9BYI3 521 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 THAP9Q9H5L6 903 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 UBE2TQ9NPD8 197 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-212ENST00000478616 SPHK2Q9NRA0 654 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 TBC1D14Q9P2M4 693 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 DNMT3LQ9UJW3 386 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 SH3BP1Q9Y3L3 701 aa19.7■□□□□ 0.74
SREBF1-212ENST00000478616 FGFR1OPO95684 399 aaKnown RBP19.69■□□□□ 0.74
SREBF1-212ENST00000478616 FYNP06241 537 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 SETSIPP0DME0 302 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 TGM1P22735 817 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 GPD2P43304 727 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 AMPD2Q01433 879 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 EFEMP1Q12805 493 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 NR1H3Q13133 447 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 DENND1BQ6P3S1 775 aa19.69■□□□□ 0.74
SREBF1-212ENST00000478616 ZC3H14Q6PJT7 736 aaKnown RBP19.69■□□□□ 0.74
SREBF1-212ENST00000478616 MIB1Q86YT6 1006 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms