RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 WDFY3Q8IZQ1 3526 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 IGHV1OR15-9A0A0B4J2B8 117 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 CACNG3O60359 315 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 CD59P13987 128 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
CCM2-210ENST00000478169 SLC5A3P53794 718 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 RING1Q06587 406 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 ACAP1Q15027 740 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 E2F4Q16254 413 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 FAM26FQ5R3K3 315 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 FAM173BQ6P4H8 233 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 PAQR9Q6ZVX9 377 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 RAB44Q7Z6P3 723 aaPredicted RBP10.22□□□□□ -0.77
CCM2-210ENST00000478169 MIB1Q86YT6 1006 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 SLC41A1Q8IVJ1 513 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 CHPFQ8IZ52 775 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 CHCHD4Q8N4Q1 142 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 DEFB119Q8N690 84 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 TRIML1Q8N9V2 468 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 IPO4Q8TEX9 1081 aaKnown RBP10.22□□□□□ -0.77
CCM2-210ENST00000478169 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 FOXJ1Q92949 421 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 HPS3Q969F9 1004 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 ZNF419Q96HQ0 510 aaPredicted RBP10.22□□□□□ -0.77
CCM2-210ENST00000478169 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 GABRG3Q99928 467 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 MED10Q9BTT4 135 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 NACA2Q9H009 215 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 FBXO44Q9H4M3 255 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 FSCN3Q9NQT6 498 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 DNAJC17Q9NVM6 304 aaKnown RBP10.22□□□□□ -0.77
CCM2-210ENST00000478169 MARK1Q9P0L2 795 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 GMIPQ9P107 970 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 WDR35Q9P2L0 1181 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 SUSD2Q9UGT4 822 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 LHX6Q9UPM6 363 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 NBEAQ8NFP9 2946 aa10.22□□□□□ -0.77
CCM2-210ENST00000478169 KNTC1P50748 2209 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GFRA2O00451 464 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 CLIC2O15247 247 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GREM1O60565 184 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 TLR5O60602 858 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 PHACTR2O75167 634 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 NDUFS2O75306 463 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GJB3O75712 270 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 AP1G2O75843 785 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 CAPNS1P04632 268 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 TYRP14679 529 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GNSP15586 552 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 NDUFV2P19404 249 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 SYT1P21579 422 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 WASP42768 502 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 CYP2J2P51589 502 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 AP3M2P53677 418 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 FAM193AP78312 1265 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 ASIC1P78348 528 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GOLGA8FQ08AF8 430 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 GOLGA8DPQ0D2H9 430 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 TRIP6Q15654 476 aaKnown RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 ZNF667Q5HYK9 610 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 WDR45BQ5MNZ6 344 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 SYCP2LQ5T4T6 812 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 EGFLAMQ63HQ2 1017 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 C12orf56Q8IXR9 622 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 FUKQ8N0W3 1084 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 SCFD1Q8WVM8 642 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 WBP2Q969T9 261 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 HSPA12BQ96MM6 686 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 C7orf25Q9BPX7 421 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 BBS2Q9BXC9 721 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 KLF16Q9BXK1 252 aaPredicted RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 ZSCAN16Q9H4T2 348 aaPredicted RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.773e-7■■■■■ 120.1
CCM2-210ENST00000478169 TLR8Q9NR97 1041 aaKnown RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
CCM2-210ENST00000478169 CYP8B1Q9UNU6 501 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 NFE2L3Q9Y4A8 694 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 PCDHB9Q9Y5E1 797 aa10.21□□□□□ -0.77
CCM2-210ENST00000478169 CKAP5Q14008 2032 aa10.21□□□□□ -0.78
CCM2-210ENST00000478169 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 NEDD8-MDP1E9PL57 170 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 TAF4O00268 1085 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 TRIM24O15164 1050 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 URB1O60287 2271 aaKnown RBP10.2□□□□□ -0.78
CCM2-210ENST00000478169 IRF1P10914 325 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 ATP5C1P36542 298 aaKnown RBP10.2□□□□□ -0.78
CCM2-210ENST00000478169 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
CCM2-210ENST00000478169 DGKGP49619 791 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 CDH8P55286 799 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 CLDN10P78369 228 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 EHHADHQ08426 723 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 BMT2Q1RMZ1 405 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 ZNF699Q32M78 642 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 PLEKHG6Q3KR16 790 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
CCM2-210ENST00000478169 PROSER1Q86XN7 944 aa10.2□□□□□ -0.78
CCM2-210ENST00000478169 RGL4Q8IZJ4 473 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms