RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 AREL1O15033 823 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 GAS7O60861 476 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 THRAP10827 490 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 ALAS1P13196 640 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF23P17027 643 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 PTPRAP18433 802 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 FOXN2P32314 431 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 DNA2P51530 1060 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 SLC18A1P54219 525 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 GNG2P59768 71 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 DLG4P78352 724 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 C19orf57Q0VDD7 668 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 COASYQ13057 564 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 CLUL1Q15846 466 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 SLX4IPQ5VYV7 408 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF746Q6NUN9 644 aaPredicted RBP13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 FAR2Q96K12 515 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 LRGUKQ96M69 825 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 AP1M1Q9BXS5 423 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 CYLDQ9NQC7 956 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
RTFDC1-207ENST00000477573 MEIS1O00470 390 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 TCEA3O75764 348 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 GH1P01241 217 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 INHBBP09529 407 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SLCO1A2P46721 670 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SLC5A3P53794 718 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 PTENP60484 403 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 ATP1A4Q13733 1029 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 RIPOR1Q6ZS17 1223 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 LPCAT2Q7L5N7 544 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 TAMM41Q96BW9 452 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 XAB2Q9HCS7 855 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 GMIPQ9P107 970 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 NEU2Q9Y3R4 380 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 PSMD10O75832 226 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 STAMBPO95630 424 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 ZBTB48P10074 688 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 PON1P27169 355 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 FDFT1P37268 417 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 ADCY8P40145 1251 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CLK3P49761 638 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 IFITM2Q01629 132 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 FBXL19Q6PCT2 694 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 KYAT3Q6YP21 454 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 MTDHQ86UE4 582 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 GALNT6Q8NCL4 622 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 GLMNQ92990 594 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 C7orf26Q96N11 449 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 RANBP9Q96S59 729 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 MXRA8Q9BRK3 442 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 CDH19Q9H159 772 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 S100A14Q9HCY8 104 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 PPM1HQ9ULR3 514 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM172BPA6NC97 362 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TM7SF2O76062 418 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ALDH3B2P48448 385 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 CD300CQ08708 224 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 SNAPC2Q13487 334 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 MPP2Q14168 576 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 MOGQ16653 247 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms