RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 REC114Q7Z4M0 266 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 NET1Q7Z628 596 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RALYLQ86SE5 291 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PATL1Q86TB9 770 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TMEM126BQ8IUX1 230 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 ERI1Q8IV48 349 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 CARFQ8N187 725 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 Q8N1X5 172 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 ANKRD35Q8N283 1001 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RASGEF1CQ8N431 466 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SRBD1Q8N5C6 995 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TERB1Q8NA31 727 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 MINDY2Q8NBR6 621 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 DDHD1Q8NEL9 900 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 NELFBQ8WX92 580 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PRCCQ92733 491 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 USP6NLQ92738 828 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 FAM89AQ96GI7 184 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PAGE5Q96GU1 130 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SNF8Q96H20 258 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 EAF1Q96JC9 268 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TCEANC2Q96MN5 208 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 CCT7Q99832 543 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SELENOSQ9BQE4 189 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 CCDC77Q9BR77 488 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HGH1Q9BTY7 390 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 BRIP1Q9BX63 1249 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TBC1D10AQ9BXI6 508 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 DRC3Q9H069 523 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RETREG1Q9H6L5 497 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 C10orf88Q9H8K7 445 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 C17orf75Q9HAS0 396 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PIH1D3Q9NQM4 214 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RHBDL2Q9NX52 303 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 GFOD1Q9NXC2 390 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 EURLQ9NYK6 297 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 NKIRAS1Q9NYS0 192 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 IL20Q9NYY1 176 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SENP1Q9P0U3 644 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HSFX1Q9UBD0 423 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TRIM10Q9UDY6 481 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 LRWD1Q9UFC0 647 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 FRMPD4Q14CM0 1322 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 MYH3P11055 1940 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 A0A088AWK7 358 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 KLF18A0A0U1RQI7 1052 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PVALEFA0A1B0GWK0 134 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TRIM75PA6NK02 468 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 GOLGA8BA8MQT2 603 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TTC34A8MYJ7 566 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 H3BNX3 289 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RASGRF2O14827 1237 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PEX1O43933 1283 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PDE8AO60658 829 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SERPINB7O75635 380 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 MOCS3O95396 460 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PSMG1O95456 288 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 GGPS1O95749 300 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TFRCP02786 760 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SERPING1P05155 500 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CTSHP09668 335 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CYP2C9P11712 490 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RARGP13631 454 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ECHS1P30084 290 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CDC25CP30307 473 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 KRT2P35908 639 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ST13P50502 369 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RAP1GDS1P52306 607 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CDR2Q01850 454 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PLOD1Q02809 727 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CAV1Q03135 178 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RELAQ04206 551 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 LRRC63Q05C16 580 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SSRP1Q08945 709 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RIPPLY1Q0D2K3 151 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ITGA7Q13683 1181 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TUBA3CQ13748 450 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TBCCQ15814 346 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TRMT5Q32P41 509 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF394Q53GI3 561 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 BOLA3Q53S33 107 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SLC10A5Q5PT55 438 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RTP2Q5QGT7 225 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TMCO4Q5TGY1 634 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ARL6IP4Q66PJ3 421 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 NFRKBQ6P4R8 1299 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PAQR3Q6TCH7 311 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CRTC3Q6UUV7 619 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF589Q86UQ0 364 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 C11orf74Q86VG3 221 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 LSMEM2Q8N112 164 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ADSSL1Q8N142 457 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CRACR2BQ8N4Y2 399 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 FITM2Q8N6M3 262 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CATSPER1Q8NEC5 780 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 CCDC110Q8TBZ0 833 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PYROXD1Q8WU10 500 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 GAB3Q8WWW8 586 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms