RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 NME3Q13232 169 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 CASP8Q14790 479 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 SLC26A9Q7LBE3 791 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 C11orf84Q9BUA3 381 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 C11orf49Q9H6J7 331 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 CCDC188H7C350 402 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 TP73O15350 636 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 RNF8O76064 485 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 OAS2P29728 719 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 SDC4P31431 198 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 CDH6P55285 790 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 USP46P62068 366 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 KCTD6Q8NC69 237 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 STK32AQ8WU08 396 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 AUTS2Q8WXX7 1259 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 UBXN6Q9BZV1 441 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 CST8O60676 142 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 MCM3P25205 808 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 PCSK1P29120 753 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 GDF10P55107 478 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 PPARDQ03181 441 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 C16orf59Q7L2K0 433 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 TP53INP2Q8IXH6 220 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 FAM124BQ9H5Z6 455 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 ETNK2Q9NVF9 386 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 H3BQF6 201 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 SULT1E1P49888 294 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 EPHB4P54760 987 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 DAOAP59103 153 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 KRT17Q04695 432 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 MTM1Q13496 603 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 CYP1B1Q16678 543 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 FUT10Q6P4F1 479 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 RCOR2Q8IZ40 523 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 UROC1Q96N76 676 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 TOX2Q96NM4 488 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 TMEM121Q9BTD3 319 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 CWH43Q9H720 699 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 GRHL1Q9NZI5 618 aa12.34□□□□□ -0.43
TNRC6A-206ENST00000477487 ALPK3Q96L96 1907 aa12.33□□□□□ -0.43
TNRC6A-206ENST00000477487 GOLGA6L10A0A0M3HER8 536 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 ALDH2P05091 517 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 GRIK1P39086 918 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 ARSEP51690 589 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 DPYSL3Q14195 570 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 C1orf228Q6PIY5 440 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 MTMR10Q9NXD2 777 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM72CH0Y354 149 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 M0QYT0 321 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 GYS2P54840 703 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 PLTPP55058 493 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 YWHAZP63104 245 aaKnown RBP12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM72AQ5TYM5 149 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM72DQ6L9T8 149 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM72BQ86X60 149 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 RFX6Q8HWS3 928 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 SLC7A14Q8TBB6 771 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FBXO25Q8TCJ0 367 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 ELAC1Q9H777 363 aaKnown RBP12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 NMUR1Q9HB89 426 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 CSNK1G1Q9HCP0 422 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 NUP205Q92621 2012 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 MYO16Q9Y6X6 1858 aa12.33□□□□□ -0.44
TNRC6A-206ENST00000477487 DPYSL4O14531 572 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms