RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 PCDH9Q9HC56 1237 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 VTA1Q9NP79 307 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 KCNQ5Q9NR82 932 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 A0A0B4J269 797 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 ZBTB5O15062 677 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 SNNO75324 88 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 STAMBPO95630 424 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 PROCP04070 461 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 KITP10721 976 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 DDX5P17844 614 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 PRKACBP22694 351 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 ALDH3B2P48448 385 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 TUBB3Q13509 450 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 OASLQ15646 514 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 FASTKD5Q7L8L6 764 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 AMIGO2Q86SJ2 522 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 FAM178BQ8IXR5 827 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 FBXO36Q8NEA4 188 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 EIF2AK1Q9BQI3 630 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 STRA6Q9BX79 667 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 SLC2A11Q9BYW1 496 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 LIN28AQ9H9Z2 209 aaKnown RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 MARCOQ9UEW3 520 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 VPS51Q9UID3 782 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
ABCF1-205ENST00000475993 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-205ENST00000475993 ITGB4P16144 1822 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 FAM155BO75949 473 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 TSHRP16473 764 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 NUP107P57740 925 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 FAAP100Q0VG06 881 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 RFPL4BQ6ZWI9 263 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 HPS6Q86YV9 775 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 CRLF3Q8IUI8 442 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 LRRC47Q8N1G4 583 aaKnown RBP10.94□□□□□ -0.66
ABCF1-205ENST00000475993 FBXW8Q8N3Y1 598 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 SPERTQ8NA61 448 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 RNF169Q8NCN4 708 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 SLC44A1Q8WWI5 657 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 FAM20AQ96MK3 541 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 C20orf27Q9GZN8 174 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 EHD1Q9H4M9 534 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 EXOC7Q9UPT5 735 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 PLLPQ9Y342 182 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 TLL2Q9Y6L7 1015 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 PCYT1AP49585 367 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
ABCF1-205ENST00000475993 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
ABCF1-205ENST00000475993 RARS2Q5T160 578 aaKnown RBP10.94□□□□□ -0.66
ABCF1-205ENST00000475993 PCGF5Q86SE9 256 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 RHPN2Q8IUC4 686 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 GABPB2Q8TAK5 448 aaPredicted RBP10.94□□□□□ -0.66
ABCF1-205ENST00000475993 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 HAUS8Q9BT25 410 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
ABCF1-205ENST00000475993 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 COL5A2P05997 1499 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 LOC105371267A0A1B0GV96 52 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 COPEO14579 308 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 MTRF1O75570 445 aaKnown RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 KLHL2O95198 593 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 FUCA1P04066 466 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ITGAVP06756 1048 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 KRT10P13645 584 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 CHI3L2Q15782 390 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 PCSK7Q16549 785 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ANKRD22Q5VYY1 191 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 LLGL2Q6P1M3 1020 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 DENND5BQ6ZUT9 1274 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ANKRD13BQ86YJ7 626 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 PALM2Q8IXS6 379 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 CATSPER1Q8NEC5 780 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 RAB3IL1Q8TBN0 382 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 HELQQ8TDG4 1101 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 DOT1LQ8TEK3 1739 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 TMEM174Q8WUU8 243 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 NKD2Q969F2 451 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 GPATCH1Q9BRR8 931 aaKnown RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 GNEQ9Y223 722 aaKnown RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 CHRNB1P11230 501 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ITGAXP20702 1163 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 L1CAMP32004 1257 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 HSPA13P48723 471 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 DCLK2Q8N568 766 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ZNF280CQ8ND82 737 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 ADCY4Q8NFM4 1077 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms