RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 DCAF6Q58WW2 860 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 SH3PXD2AQ5TCZ1 1133 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 DUPD1Q68J44 220 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 RFX6Q8HWS3 928 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 SCML4Q8N228 414 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 ZMIZ2Q8NF64 920 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 OR10T2Q8NGX3 314 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 IRGQQ8WZA9 623 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 HERVK_113Q902F9 699 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 CCDC114Q96M63 670 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 TMEM209Q96SK2 561 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 KCNK16Q96T55 309 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 C11orf84Q9BUA3 381 aaPredicted RBP10.66□□□□□ -0.7
PCCB-213ENST00000475214 TRIM62Q9BVG3 475 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 CALN1Q9BXU9 219 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 ULBP1Q9BZM6 244 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 TRIM31Q9BZY9 425 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 ZCWPW1Q9H0M4 648 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 VIPAS39Q9H9C1 493 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 POPDC2Q9HBU9 364 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCCB-213ENST00000475214 TMLHEQ9NVH6 421 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 R3HDM2Q9Y2K5 976 aaKnown RBP10.66□□□□□ -0.7
PCCB-213ENST00000475214 TTC3P53804 2025 aa10.66□□□□□ -0.7
PCCB-213ENST00000475214 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■■■■ 109.7
PCCB-213ENST00000475214 OR6C75A6NL08 312 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 H7C4K7 107 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 RRP9O43818 475 aaKnown RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 CST8O60676 142 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 SASH3O75995 380 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 ENDOD1O94919 500 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 UPP2O95045 317 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 GRIK1P39086 918 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 SLC11A1P49279 550 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 CDR1P51861 262 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 HDAC4P56524 1084 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 KRT17Q04695 432 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 PTK6Q13882 451 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 RASIP1Q5U651 963 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 FAM171A1Q5VUB5 890 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 ZNF280DQ6N043 979 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 FUT10Q6P4F1 479 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 BBS12Q6ZW61 710 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 GSTA5Q7RTV2 222 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 ANKS1BQ7Z6G8 1248 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 VSIG1Q86XK7 387 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
PCCB-213ENST00000475214 CRIPAKQ8N1N5 446 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 ATG4AQ8WYN0 398 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
PCCB-213ENST00000475214 GDAP1L1Q96MZ0 367 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 SLC2A13Q96QE2 648 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 GAS2L1Q99501 681 aaPredicted RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 SNRNP25Q9BV90 132 aaKnown RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 RRN3Q9NYV6 651 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 DRG1Q9Y295 367 aaKnown RBP10.65□□□□□ -0.7
PCCB-213ENST00000475214 SNX24Q9Y343 169 aa10.65□□□□□ -0.7
PCCB-213ENST00000475214 MICAL3Q7RTP6 2002 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 M0QYT0 321 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 LIASO43766 372 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 EFCAB14O75071 495 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 LTFP02788 710 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 AMHP03971 560 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 GALTP07902 379 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 CD48P09326 243 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 USP17L7P0C7H9 530 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 ACRP10323 421 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 FGFR3P22607 806 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 RDXP35241 583 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 ALDH7A1P49419 539 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 ARSEP51690 589 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 CACNA2D1P54289 1103 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 BCAR1P56945 870 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 DEUP1Q05D60 604 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 ADCY2Q08462 1091 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 CALCOCO2Q13137 446 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 DPYSL3Q14195 570 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 MRPL58Q14197 206 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 TRADDQ15628 312 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 RAB6CQ53S08 254 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 PM20D1Q6GTS8 502 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms