RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 MDM4O15151 490 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CEP104O60308 925 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ZRANB2O95218 330 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TRUB2O95900 331 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ZBED1O96006 694 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 C1RP00736 705 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 IGLV3-25P01717 112 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TUBBP07437 444 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 UQCRHP07919 91 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 KRT7P08729 469 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 HAPLN1P10915 354 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TCF4P15884 667 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 IBSPP21815 317 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PSMA2P25787 234 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 IL1R2P27930 398 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 MIPP30301 263 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PPM1AP35813 382 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PBX3P40426 434 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 NDUFV1P49821 464 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TKTL1P51854 596 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 HDAC4P56524 1084 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ADIGQ0VDE8 80 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 RAB33AQ14088 237 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 BTG3Q14201 252 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 SLC25A52Q3SY17 297 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CTXN3Q4LDR2 81 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 SLC39A12Q504Y0 691 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 GLE1Q53GS7 698 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 BOLA3Q53S33 107 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 OTUD1Q5VV17 481 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TPGS2Q68CL5 300 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 OTOP2Q7RTS6 562 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 SPATA2LQ8IUW3 424 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 HERC6Q8IVU3 1022 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 RCOR2Q8IZ40 523 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF276Q8N554 614 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 C12orf50Q8NA57 414 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CLEC4CQ8WTT0 213 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ANKRD7Q92527 254 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 UBXN4Q92575 508 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 RBM41Q96IZ5 413 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CAPZA3Q96KX2 299 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PSMB7Q99436 277 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 RAD9AQ99638 391 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CLSTN3Q9BQT9 956 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 MED10Q9BTT4 135 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PLVAPQ9BX97 442 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ULBP1Q9BZM6 244 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 PRO3102Q9H379 93 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 POPDC2Q9HBU9 364 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 CXXC1Q9P0U4 656 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 FNIP2Q9P278 1114 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 AFF4Q9UHB7 1163 aaKnown RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 RAB21Q9UL25 225 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 SCML2Q9UQR0 700 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-207ENST00000474825 IRAK3Q9Y616 596 aa6.92□□□□□ -1.3
ATG4A-207ENST00000474825 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 YJEFN3A6XGL0 299 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 E7ENQ6 273 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 C5orf67F2Z3F1 127 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TRIM66O15016 1216 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 RNF8O76064 485 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ADH1BP00325 375 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 FGGP02679 453 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 OR4Q2P0C623 313 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ZDHHC11BP0C7U3 371 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 RARAP10276 462 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CTSAP10619 480 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 LCP1P13796 627 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CYP2F1P24903 491 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SDC4P31431 198 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CDKN2BP42772 138 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 MAGEA10P43363 369 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SLC5A3P53794 718 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 AIF1P55008 147 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SCAPQ12770 1279 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 PTPROQ16827 1216 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CTC1Q2NKJ3 1217 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ATP13A4Q4VNC1 1196 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SEL1L2Q5TEA6 688 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CCDC181Q5TID7 509 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TXNRD3NBQ6F5E7 133 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 AADACL2Q6P093 401 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 WDR93Q6P2C0 686 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 DRICH1Q6PGQ1 229 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 RNF19BQ6ZMZ0 732 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ANKS1BQ7Z6G8 1248 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TMCO2Q7Z6W1 182 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SCD5Q86SK9 330 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms