RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 ERBB2P04626 1255 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 H2AFZP0C0S5 128 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 LCP1P13796 627 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 EPCAMP16422 314 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 MMP8P22894 467 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 GTF2F1P35269 517 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 ACADSBP45954 432 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PLA2G4AP47712 749 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 GABRB2P47870 512 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 NRIP1P48552 1158 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 TKTL1P51854 596 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 GALCP54803 685 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 SNX16P57768 344 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 RPL10AP62906 217 aaKnown RBP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 GPC5P78333 572 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 KRT83P78385 493 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PTP4A2Q12974 167 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PDCLQ13371 301 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 ZNF268Q14587 947 aaPredicted RBP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 DUSP6Q16828 381 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PTPN20Q4JDL3 420 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 HS1BP3Q53T59 392 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 RAB41Q5JT25 222 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 CYP4A22Q5TCH4 519 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 LLGL2Q6P1M3 1020 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 MMS22LQ6ZRQ5 1243 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 CCDC149Q6ZUS6 474 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 H2AFVQ71UI9 128 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 MCOLN2Q8IZK6 566 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 NUP93Q8N1F7 819 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 ACRBPQ8NEB7 543 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 SCAMP5Q8TAC9 235 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 RHBDD1Q8TEB9 315 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 HDAC7Q8WUI4 952 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 C18orf8Q96DM3 657 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 VCPIP1Q96JH7 1222 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 SPATA17Q96L03 361 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 FAM161BQ96MY7 647 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 CPXM1Q96SM3 734 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 DESI2Q9BSY9 194 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PACSIN1Q9BY11 444 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 PLEKHA4Q9H4M7 779 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 SYNCQ9H7C4 482 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 LRRC4Q9HBW1 653 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 LMCD1Q9NZU5 365 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 TJP2Q9UDY2 1190 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 REXO2Q9Y3B8 237 aaKnown RBP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC93-207ENST00000474006 CITO14578 2027 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 SCN1AP35498 2009 aa7.98□□□□□ -1.13
CCDC93-207ENST00000474006 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 ANKRD62A6NC57 917 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 SLC38A8A6NNN8 435 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 E5RJQ4 531 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PAPSS1O43252 624 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 IPO7O95373 1038 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 ZBED1O96006 694 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 C8AP07357 584 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 ATF6P18850 670 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 POU3F3P20264 500 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 ABCB4P21439 1286 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 EPHB3P54753 998 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 RBM10P98175 930 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 TWF1Q12792 350 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 HYAL1Q12794 435 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 ADGRE1Q14246 886 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 TCEAL5Q5H9L2 206 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 HABP4Q5JVS0 413 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 LIN9Q5TKA1 542 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 OR6B2Q6IFH4 312 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 TMEM214Q6NUQ4 689 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PPP1R2P3Q6NXS1 205 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 MON1BQ7L1V2 547 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 GPRIN1Q7Z2K8 1008 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 DNAJB7Q7Z6W7 309 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 MSANTD4Q8NCY6 345 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 SLC7A14Q8TBB6 771 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 NDRG1Q92597 394 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PPP2R3CQ969Q6 453 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 TRIM44Q96DX7 344 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 CEP295NLQ96MC4 621 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 CDCA3Q99618 268 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 C11orf70Q9BRQ4 267 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 MIS12Q9H081 205 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 THAP2Q9H0W7 228 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 NSUN3Q9H649 340 aaKnown RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PNPLA8Q9NP80 782 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 MAN1C1Q9NR34 630 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 IL37Q9NZH6 218 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 STIM2Q9P246 746 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 MYO1AQ9UBC5 1043 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 CHORDC1Q9UHD1 332 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-207ENST00000474006 DPP7Q9UHL4 492 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 FBXW11Q9UKB1 542 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PYCARDQ9ULZ3 195 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 TFR2Q9UP52 801 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 INSL5Q9Y5Q6 135 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 HCFC2Q9Y5Z7 792 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms