RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ATXN3LQ9H3M9 355 aa9.59□□□□□ -0.87
SMC4-214ENST00000472991 AVENQ9NQS1 362 aaPredicted RBP9.59□□□□□ -0.87
SMC4-214ENST00000472991 UXTQ9UBK9 157 aaPredicted RBP9.59□□□□□ -0.87
SMC4-214ENST00000472991 MYOFQ9NZM1 2061 aa9.59□□□□□ -0.87
SMC4-214ENST00000472991 C2CD4DB7Z1M9 353 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 XPO1O14980 1071 aaKnown RBP9.58□□□□□ -0.88
SMC4-214ENST00000472991 MED7O43513 233 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
SMC4-214ENST00000472991 FGF19O95750 216 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 F11P03951 625 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 SETSIPP0DME0 302 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 CYP11B1P15538 503 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 CDC25CP30307 473 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 STAT1P42224 750 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 RGS7P49802 495 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 SLC8A3P57103 927 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 BPIFB4P59827 614 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 ZP2Q05996 745 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 TEAD2Q15562 447 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 STXBP5Q5T5C0 1151 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 TAF3Q5VWG9 929 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 DENND1BQ6P3S1 775 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 SARM1Q6SZW1 724 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 TMEM150AQ86TG1 271 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 PIGZQ86VD9 579 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 ADHFE1Q8IWW8 467 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 FGF13Q92913 245 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 SECISBP2LQ93073 1101 aaKnown RBP9.58□□□□□ -0.88
SMC4-214ENST00000472991 FBXO32Q969P5 355 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 MYRFLQ96LU7 910 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 PNPLA8Q9NP80 782 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
SMC4-214ENST00000472991 ITIH6Q6UXX5 1313 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 COL4A2P08572 1712 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 LRRC53A6NM62 1247 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 YWHAQP27348 245 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 KRT9P35527 623 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 PLA2G4AP47712 749 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 TKTL1P51854 596 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 KIF11P52732 1056 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 ARID5AQ03989 594 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 ADIGQ0VDE8 80 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 TAF10Q12962 218 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 MEA1Q16626 185 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 FIGNQ5HY92 759 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 E4F1Q66K89 784 aaPredicted RBP9.57□□□□□ -0.88
SMC4-214ENST00000472991 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 OTOP3Q7RTS5 596 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 NOP9Q86U38 636 aaKnown RBP9.57□□□□□ -0.88
SMC4-214ENST00000472991 VSTM4Q8IW00 320 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 SLC20A1Q8WUM9 679 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 SLC35F5Q8WV83 523 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 ACSF2Q96CM8 615 aaPredicted RBP9.57□□□□□ -0.88
SMC4-214ENST00000472991 MCRS1Q96EZ8 462 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 NECAB3Q96P71 396 aaPredicted RBP9.57□□□□□ -0.88
SMC4-214ENST00000472991 SLITRK1Q96PX8 696 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 SLITRK6Q9H5Y7 841 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 LRRC4Q9HBW1 653 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.57□□□□□ -0.882e-7■■■■□ 26.2
SMC4-214ENST00000472991 IL37Q9NZH6 218 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 EHD2Q9NZN4 543 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 GMIPQ9P107 970 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 NOCTQ9UK39 431 aaKnown RBP9.57□□□□□ -0.88
SMC4-214ENST00000472991 CDH7Q9ULB5 785 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 MYO6Q9UM54 1294 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 NR2E1Q9Y466 385 aa9.57□□□□□ -0.88
SMC4-214ENST00000472991 A0A1W2PQJ5 194 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 FAM170AA1A519 330 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 FAM92AA1XBS5 289 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 LOC730098B7Z3J9 87 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 PIK3R2O00459 728 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 ABL1P00519 1130 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 GYPCP04921 128 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 MMEP08473 750 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 LAMP2P13473 410 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 LCP1P13796 627 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 FERP16591 822 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 GPD2P43304 727 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 NR1H3Q13133 447 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 ASIC2Q16515 512 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 ARHGAP15Q53QZ3 475 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 RAB41Q5JT25 222 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 GPR158Q5T848 1215 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 TXNDC8Q6A555 127 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 TMC6Q7Z403 805 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 C1orf131Q8NDD1 294 aaKnown RBP9.56□□□□□ -0.88
SMC4-214ENST00000472991 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 ST13P5Q8NFI4 369 aaPredicted RBP9.56□□□□□ -0.88
SMC4-214ENST00000472991 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
SMC4-214ENST00000472991 MRPS31Q92665 395 aaKnown RBP9.56□□□□□ -0.88
SMC4-214ENST00000472991 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
SMC4-214ENST00000472991 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms