RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 CAPN9O14815 690 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 ADH1AP07327 375 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 PYGMP11217 842 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 YWHAQP27348 245 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 MIPP30301 263 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 PCK1P35558 622 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 ALDH1A3P47895 512 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 RGS19P49795 217 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 ATXN1P54253 815 aaKnown RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 HDAC4P56524 1084 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 YWHAGP61981 247 aaKnown RBP eCLIP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 SLC25A11Q02978 314 aaKnown RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 TAF10Q12962 218 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 OTUD1Q5VV17 481 aaPredicted RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 PBKQ96KB5 322 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 CEP295NLQ96MC4 621 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 EMILIN2Q9BXX0 1053 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 MAFFQ9ULX9 164 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 USP18Q9UMW8 372 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 MAGED2Q9UNF1 606 aaPredicted RBP13.41□□□□□ -0.26
RUNX1-213ENST00000469087 YIPF1Q9Y548 306 aa13.41□□□□□ -0.26
RUNX1-213ENST00000469087 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PRRG1O14668 218 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 ENDOD1O94919 500 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 TRUB2O95900 331 aaKnown RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 GJC1P36383 396 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 RWDD2BP57060 319 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 TWF1Q12792 350 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 KCNT1Q5JUK3 1230 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 GOLGA1Q92805 767 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PEBP4Q96S96 227 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 TTLL2Q9BWV7 592 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 CARD9Q9H257 536 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SLC28A3Q9HAS3 691 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 ABCC13Q9NSE7 274 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 COMMD8Q9NX08 183 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 GMIPQ9P107 970 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PLXNA3P51805 1871 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 M0QYT0 321 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 CES2O00748 559 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 CEP104O60308 925 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SULT1E1P49888 294 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 RAB30Q15771 203 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 BTBD8Q5XKL5 378 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 BEND5Q7L4P6 421 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 SLC7A14Q8TBB6 771 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 ADAM32Q8TC27 787 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 ZWILCHQ9H900 591 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 NUDT5Q9UKK9 219 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
RUNX1-213ENST00000469087 COL4A4P53420 1690 aaPredicted RBP13.4□□□□□ -0.26
RUNX1-213ENST00000469087 MYO7AQ13402 2215 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 CSH1P0DML2 217 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 CSH2P0DML3 217 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 RARAP10276 462 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 CLCN4P51793 760 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 HADHQ16836 314 aaKnown RBP13.39□□□□□ -0.27
RUNX1-213ENST00000469087 WHAMMP3Q1A5X7 153 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 SMTNL2Q2TAL5 461 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
RUNX1-213ENST00000469087 KATNAL2Q8IYT4 538 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
RUNX1-213ENST00000469087 MYRFLQ96LU7 910 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 CARD6Q9BX69 1037 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 PIGVQ9NUD9 493 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 TRANK1O15050 2925 aa13.39□□□□□ -0.27
RUNX1-213ENST00000469087 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 PER2O15055 1255 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 LPXNO60711 386 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 ZRANB2O95218 330 aaKnown RBP eCLIP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 DESP17661 470 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 NME3Q13232 169 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms