RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 DNAJB7Q7Z6W7 309 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 DNAAF5Q86Y56 855 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SCUBE3Q8IX30 993 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 WDTC1Q8N5D0 677 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SCAMP5Q8TAC9 235 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF564Q8TBZ8 553 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TRMT2BQ96GJ1 504 aaKnown RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 PACSIN1Q9BY11 444 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ATXN3LQ9H3M9 355 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 POPDC2Q9HBU9 364 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TRPC7Q9HCX4 862 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 LZTFL1Q9NQ48 299 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 OLA1Q9NTK5 396 aaKnown RBP8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM30AQ9NV96 361 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ASNSD1Q9NWL6 643 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 GMIPQ9P107 970 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 UVRAGQ9P2Y5 699 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 CD207Q9UJ71 328 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ANAPC7Q9UJX3 599 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 SCML2Q9UQR0 700 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 PPP2R2CQ9Y2T4 447 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 NCANO14594 1321 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 TTC28Q96AY4 2481 aa8.51□□□□□ -1.05
HDAC6-216ENST00000468949 A0A1W2PQH9 124 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 MACROD2A1Z1Q3 448 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM110-MUSTN1A8MSY1 372 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 MYO1FO00160 1098 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 TNFRSF10BO14763 440 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF263O14978 683 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 LINC01565O15544 149 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 DAB1O75553 588 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 GRAP2O75791 330 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 GLP2RO95838 553 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 POU2F2P09086 479 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 PTPN2P17706 415 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 PSMA2P25787 234 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 GABRR2P28476 465 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SDC4P31431 198 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 LTBRP36941 435 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SSR1P43307 286 aaKnown RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SULT1E1P49888 294 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 YWHAZP63104 245 aaKnown RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 ITIH3Q06033 890 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 DCAF6Q58WW2 860 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 C10orf120Q5SQS8 335 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 ANKRD54Q6NXT1 300 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SND1Q7KZF4 910 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SLC26A9Q7LBE3 791 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 MON1AQ86VX9 555 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SCML4Q8N228 414 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 SMRP1Q8NCR6 262 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 CMASQ8NFW8 434 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 CLEC4CQ8WTT0 213 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 MCRS1Q96EZ8 462 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 RIPOR3Q96MK2 946 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 NECAB3Q96P71 396 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 TTLL2Q9BWV7 592 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 APOL5Q9BWW9 433 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 FAM204AQ9H8W3 233 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 ABCC13Q9NSE7 274 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 TRMT1Q9NXH9 659 aaKnown RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 RRN3Q9NYV6 651 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 TJP2Q9UDY2 1190 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 GUCA1BQ9UMX6 200 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
HDAC6-216ENST00000468949 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
HDAC6-216ENST00000468949 BRWD1Q9NSI6 2320 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 A0A0A6YYK5 440 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 SIGLEC16A6NMB1 481 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 YJEFN3A6XGL0 299 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 E7ENQ6 273 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 KIF5CO60282 957 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 TLR5O60602 858 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RNF8O76064 485 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 CYP1A2P05177 515 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RHOP08100 348 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RARGP13631 454 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 IL9P15248 144 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PDGFRAP16234 1089 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 GPD1P21695 349 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 DDX6P26196 483 aaKnown RBP eCLIP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 GBP1P32455 592 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RPL34P49207 117 aaKnown RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 USP46P62068 366 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RBM10P98175 930 aaKnown RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 DLX2Q07687 328 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ADAM15Q13444 863 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 MAMLD1Q13495 774 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 CLUL1Q15846 466 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 CDO1Q16878 200 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ODF2Q5BJF6 829 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms