RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 ARHGAP17Q68EM7 881 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 KLHDC10Q6PID8 442 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 HTR3DQ70Z44 454 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 CCDC186Q7Z3E2 898 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 CACNA2D4Q7Z3S7 1137 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 TMEM25Q86YD3 366 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 CCDC33Q8N5R6 958 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 FAM160A2Q8N612 972 aaPredicted RBP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 NAT16Q8N8M0 369 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 ANKRD52Q8NB46 1076 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 TSTD1Q8NFU3 115 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 USP33Q8TEY7 942 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 GAB3Q8WWW8 586 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 CDK5RAP1Q96SZ6 601 aaKnown RBP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 DUSP9Q99956 384 aaKnown RBP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 KLF16Q9BXK1 252 aaPredicted RBP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 SPHK2Q9NRA0 654 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 OSER1Q9NX31 292 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 DEC1Q9P2X7 70 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 HESX1Q9UBX0 185 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 LSM7Q9UK45 103 aaKnown RBP7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 NUDT5Q9UKK9 219 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 KIAA1257Q9ULG3 409 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 SDK1Q7Z5N4 2213 aa7.56□□□□□ -1.2
SNRPD3-205ENST00000468770 HELZP42694 1942 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 NEDD8-MDP1E9PL57 170 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 MDM4O15151 490 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 PMM2O15305 246 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 HOXC11O43248 304 aaPredicted RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 LRP3O75074 770 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TULP3O75386 442 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 FGFR1OPO95684 399 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 GNA14O95837 355 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 VDRP11473 427 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 BMP6P22004 513 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TGM1P22735 817 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TIE1P35590 1138 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TNFRSF4P43489 277 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TKTL1P51854 596 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 STX17P56962 302 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 COG7P83436 770 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 KDSRQ06136 332 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 CRY1Q16526 586 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 CSRP2Q16527 193 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 GOLGA7BQ2TAP0 167 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 USP39Q53GS9 565 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 EMC10Q5UCC4 262 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TMEM270Q6UE05 265 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TPGS1Q6ZTW0 290 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 DGLUCYQ7Z3D6 616 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 PIGZQ86VD9 579 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 C12orf40Q86WS4 652 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 MIB1Q86YT6 1006 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 ARHGAP18Q8N392 663 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 ZNF276Q8N554 614 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 WBP2Q969T9 261 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 LOXL4Q96JB6 756 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 XPO6Q96QU8 1125 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 BBS2Q9BXC9 721 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 LRRC4Q9HBW1 653 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 CLIC5Q9NZA1 410 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 WDR35Q9P2L0 1181 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 TSPAN16Q9UKR8 245 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 MMP17Q9ULZ9 603 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 CTNND2Q9UQB3 1225 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 ZNF510Q9Y2H8 683 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 PCDHB4Q9Y5E5 795 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 MYOFQ9NZM1 2061 aa7.55□□□□□ -1.2
SNRPD3-205ENST00000468770 ANTXRLA6NF34 631 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 XPO1O14980 1071 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 P4HA2O15460 535 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 FOXD2O60548 495 aaPredicted RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 GREM1O60565 184 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ALDH1A2O94788 518 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 RHOBTB1O94844 696 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 KLF8O95600 359 aaPredicted RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ZBED1O96006 694 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 PAEPP09466 180 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 TYRP14679 529 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 GBP1P32455 592 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CHKAP35790 457 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 BCAT1P54687 386 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 YWHAGP61981 247 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms