RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ITIH3Q06033 890 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 IFRD2Q12894 506 aaPredicted RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 DCAF6Q58WW2 860 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 LILRA6Q6PI73 481 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 RSRC2Q7L4I2 434 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 EXD1Q8NHP7 514 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 ACSF2Q96CM8 615 aaPredicted RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 FBXO44Q9H4M3 255 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 KLHL11Q9NVR0 708 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 MAFFQ9ULX9 164 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 YIPF1Q9Y548 306 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 A0A1W2PQH9 124 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 GRM6O15303 877 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 KRT7P08729 469 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 ZDHHC11BP0C7U3 371 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 RARAP10276 462 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 HMGA1P17096 107 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 GJC1P36383 396 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 ERVK-21P61565 698 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 TAZQ16635 292 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 SPATA4Q8NEY3 305 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 GIPC2Q8TF65 315 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 RAPGEF5Q92565 580 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 EDEM1Q92611 657 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 SLITRK1Q96PX8 696 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 NCAPGQ9BPX3 1015 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 WDR6Q9NNW5 1121 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 DDX56Q9NY93 547 aaKnown RBP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 GMIPQ9P107 970 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A1-202ENST00000467182 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
COL4A1-202ENST00000467182 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 PI4K2BG5E9Z4 385 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 H0YGN5 161 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TGM5O43548 720 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 FGGP02679 453 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 KRT1P04264 644 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 NCAM1P13591 858 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 YWHAQP27348 245 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 PTPN7P35236 360 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 IRS1P35568 1242 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 PAFAH1B1P43034 410 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TERF1P54274 439 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 C2orf54Q08AI8 447 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 SMTNL2Q2TAL5 461 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 SEL1L2Q5TEA6 688 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CCDC181Q5TID7 509 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 MFSD7Q6UXD7 560 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TMC7Q7Z402 723 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TAC4Q86UU9 113 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 MON1AQ86VX9 555 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 RCOR2Q8IZ40 523 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CCDC185Q8N715 623 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 MRPL43Q8N983 215 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 NOA1Q8NC60 698 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 DQX1Q8TE96 717 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TEKT4Q8WW24 435 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TGS1Q96RS0 853 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 CYP4F11Q9HBI6 524 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 ABCC13Q9NSE7 274 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
COL4A1-202ENST00000467182 PIGVQ9NUD9 493 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 FBXW11Q9UKB1 542 aa13.56□□□□□ -0.24
COL4A1-202ENST00000467182 STAP1Q9ULZ2 295 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms