RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SDK1Q7Z5N4 2213 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-206ENST00000464750 PPP1R3GB7ZBB8 358 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 MDM4O15151 490 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 AXIN1O15169 862 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 HOXC11O43248 304 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-206ENST00000464750 KAT7O95251 611 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 APBB3O95704 486 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 CCDC192P0DO97 292 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 YWHAEP62258 255 aaKnown RBP27.23■■□□□ 1.95
U2AF1-206ENST00000464750 LRMPQ12912 555 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 SCD5Q86SK9 330 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 SFTPA1Q8IWL2 248 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 ARHGEF4Q9NR80 690 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 SPHK2Q9NRA0 654 aa27.23■■□□□ 1.95
U2AF1-206ENST00000464750 LSM7Q9UK45 103 aaKnown RBP27.23■■□□□ 1.95
U2AF1-206ENST00000464750 BICDL2A1A5D9 508 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 PSEN1P49768 467 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 LMNB2Q03252 620 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 GOLGA7BQ2TAP0 167 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 C10orf120Q5SQS8 335 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 BTBD8Q5XKL5 378 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 KLHDC10Q6PID8 442 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 HTR3DQ70Z44 454 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 PIGZQ86VD9 579 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 DNMT3LQ9UJW3 386 aa27.22■■□□□ 1.95
U2AF1-206ENST00000464750 GREM1O60565 184 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 TBXAS1P24557 533 aaPredicted RBP27.21■■□□□ 1.95
U2AF1-206ENST00000464750 SLC8A3P57103 927 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 MRPS21P82921 87 aaKnown RBP27.21■■□□□ 1.95
U2AF1-206ENST00000464750 ANO4Q32M45 955 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 FOXR2Q6PJQ5 311 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 TADA2BQ86TJ2 420 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 TTC30AQ86WT1 665 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 TMEM25Q86YD3 366 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 ETFBKMTQ8IXQ9 262 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 CCDC33Q8N5R6 958 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 NAT16Q8N8M0 369 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 ANKRD52Q8NB46 1076 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 TSTD1Q8NFU3 115 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 MMP17Q9ULZ9 603 aa27.21■■□□□ 1.95
U2AF1-206ENST00000464750 MYO18AQ92614 2054 aaKnown RBP27.21■■□□□ 1.95
U2AF1-206ENST00000464750 CACNA1AO00555 2505 aa27.2■■□□□ 1.95
U2AF1-206ENST00000464750 LRP3O75074 770 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 RALAP11233 206 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 CD19P15391 556 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 GRIA2P42262 883 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 RSPO4Q2I0M5 234 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-206ENST00000464750 SGO2Q562F6 1265 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 ERMP1Q7Z2K6 904 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 CACNA2D4Q7Z3S7 1137 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 PHTF2Q8N3S3 785 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 UBR7Q8N806 425 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 NT5C1BQ96P26 610 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 UBXN6Q9BZV1 441 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 CLIC5Q9NZA1 410 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 TSPAN16Q9UKR8 245 aa27.2■■□□□ 1.94
U2AF1-206ENST00000464750 TULP3O75386 442 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 PLA2G4AP47712 749 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 BCAT1P54687 386 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 STX17P56962 302 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 PAK1Q13153 545 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 PUM1Q14671 1186 aaKnown RBP eCLIP27.19■■□□□ 1.94
U2AF1-206ENST00000464750 RAB41Q5JT25 222 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 KBTBD6Q86V97 674 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 MIB1Q86YT6 1006 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 CDK5RAP1Q96SZ6 601 aaKnown RBP27.19■■□□□ 1.94
U2AF1-206ENST00000464750 DLL3Q9NYJ7 618 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 EBF1Q9UH73 591 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 RASAL2Q9UJF2 1139 aa27.19■■□□□ 1.94
U2AF1-206ENST00000464750 PMM2O15305 246 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 CHRM1P11229 460 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-206ENST00000464750 TIE1P35590 1138 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 ZNF276Q8N554 614 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 ALLCQ8N6M5 410 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 SEMA4GQ9NTN9 838 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 DEC1Q9P2X7 70 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 HESX1Q9UBX0 185 aa27.18■■□□□ 1.94
U2AF1-206ENST00000464750 DNAH14Q0VDD8 3507 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 A0A0A0MRY4 1105 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 PRR5-ARHGAP8B1AHC4 643 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 TULP2O00295 520 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 XPO1O14980 1071 aaKnown RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 KLF8O95600 359 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 TNFRSF4P43489 277 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 KIR2DL1P43626 348 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 DGKEP52429 567 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 ARHGAP8P85298 464 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 PDE4CQ08493 712 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 CETN1Q12798 172 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 PREPLQ4J6C6 727 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 ARHGAP18Q8N392 663 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 IL17RCQ8NAC3 791 aa27.17■■□□□ 1.94
U2AF1-206ENST00000464750 TXNDC5Q8NBS9 432 aaKnown RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.17■■□□□ 1.94
U2AF1-206ENST00000464750 TBC1D3BA6NDS4 549 aa27.16■■□□□ 1.94
U2AF1-206ENST00000464750 NEDD8-MDP1E9PL57 170 aa27.16■■□□□ 1.94
U2AF1-206ENST00000464750 STC2O76061 302 aa27.16■■□□□ 1.94
U2AF1-206ENST00000464750 VDRP11473 427 aa27.16■■□□□ 1.94
U2AF1-206ENST00000464750 TKTL1P51854 596 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms