RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 ULBP1Q9BZM6 244 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 CLIC5Q9NZA1 410 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 HESX1Q9UBX0 185 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 AJAP1Q9UKB5 411 aaPredicted RBP13.63□□□□□ -0.23
XRN1-203ENST00000463916 ZNF292O60281 2723 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 FANCMQ8IYD8 2048 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 PRR23AA6NEV1 266 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 PIK3R2O00459 728 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SLC9A3R1O14745 358 aaPredicted RBP13.63□□□□□ -0.23
XRN1-203ENST00000463916 GFRA3O60609 400 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 ZBED1O96006 694 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 CXCL12P48061 93 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SLC6A11P48066 632 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SLC8A3P57103 927 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 DMWDQ09019 674 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 NR1H3Q13133 447 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 LY6G5CQ5SRR4 150 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 KLHDC10Q6PID8 442 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 C12orf40Q86WS4 652 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 CD101Q93033 1021 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
XRN1-203ENST00000463916 SIX2Q9NPC8 291 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 DNMT3LQ9UJW3 386 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SH3BP1Q9Y3L3 701 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 DMXL1Q9Y485 3027 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 BECN2A8MW95 431 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 RNF40O75150 1001 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 KRT5P13647 590 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 PSEN1P49768 467 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 RGS7P49802 495 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 CCR3P51677 355 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 TMEM25Q86YD3 366 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 SYNPOQ8N3V7 929 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 ZBTB44Q8NCP5 570 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 KCTD13Q8WZ19 329 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 NKD2Q969F2 451 aaPredicted RBP13.62□□□□□ -0.23
XRN1-203ENST00000463916 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 NDST4Q9H3R1 872 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 DACH1Q9UI36 760 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 GTPBP10A4D1E9 387 aaKnown RBP13.62□□□□□ -0.23
XRN1-203ENST00000463916 YJEFN3A6XGL0 299 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 E7ENQ6 273 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 K7ESF4 209 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 M0QYV0 167 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 KLKB1P03952 638 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 SETSIPP0DME0 302 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 DRD1P21728 446 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 YWHAGP61981 247 aaKnown RBP eCLIP13.62□□□□□ -0.23
XRN1-203ENST00000463916 ARHGAP44Q17R89 818 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 VWA3BQ502W6 1294 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 P2RY11Q96G91 374 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 LRRC4Q9HBW1 653 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
XRN1-203ENST00000463916 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 K7EQS6 105 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 STC2O76061 302 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 LCP1P13796 627 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
XRN1-203ENST00000463916 EFEMP1Q12805 493 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 KCNJ12Q14500 433 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
XRN1-203ENST00000463916 CLEC4CQ8WTT0 213 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 ZSCAN32Q9NX65 697 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 GPR179Q6PRD1 2367 aa13.61□□□□□ -0.23
XRN1-203ENST00000463916 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 RALAP11233 206 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ADH5P11766 374 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 GPD2P43304 727 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 MFAP3P55082 362 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 KCNMA1Q12791 1236 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 TCP11X2Q5H9J9 407 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 Q6ZNB5 142 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ENOX1Q8TC92 643 aaKnown RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 EDEM1Q92611 657 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 OTUB2Q96DC9 234 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 SPHK2Q9NRA0 654 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 RASAL2Q9UJF2 1139 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 PCDHGA2Q9Y5H1 932 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 TRIM24O15164 1050 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ADH1CP00326 375 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 HMBSP08397 361 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms