RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TAF5Q15542 800 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 C2CD6Q53TS8 623 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 ZNF397Q8NF99 534 aaPredicted RBP19.86■□□□□ 0.77
LMNB1-204ENST00000463908 E2F7Q96AV8 911 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 PIWIL1Q96J94 861 aaKnown RBP19.86■□□□□ 0.77
LMNB1-204ENST00000463908 NOX5Q96PH1 765 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 GKN1Q9NS71 199 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 SORCS3Q9UPU3 1222 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 CEP83Q9Y592 693 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 MYO10Q9HD67 2058 aa19.86■□□□□ 0.77
LMNB1-204ENST00000463908 MBL2P11226 248 aaPredicted RBP19.85■□□□□ 0.77
LMNB1-204ENST00000463908 RALAP11233 206 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 PSMC3P17980 439 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 ATP5C1P36542 298 aaKnown RBP19.85■□□□□ 0.77
LMNB1-204ENST00000463908 GPC5P78333 572 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 GOLGA8FQ08AF8 430 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 GOLGA8DPQ0D2H9 430 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 CLEC16AQ2KHT3 1053 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 KLHDC10Q6PID8 442 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 TRIM72Q6ZMU5 477 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 ERICH1Q86X53 443 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 FMNL3Q8IVF7 1028 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 SLC30A5Q8TAD4 765 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 EDEM1Q92611 657 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 WBP2Q969T9 261 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 MRFAP1L1Q96HT8 127 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 LRFN3Q9BTN0 628 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 KLF16Q9BXK1 252 aaPredicted RBP19.85■□□□□ 0.77
LMNB1-204ENST00000463908 NUCKS1Q9H1E3 243 aaKnown RBP19.85■□□□□ 0.77
LMNB1-204ENST00000463908 SMPD4Q9NXE4 827 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 CPQQ9Y646 472 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 MUC6Q6W4X9 2439 aa19.85■□□□□ 0.77
LMNB1-204ENST00000463908 DPYSL4O14531 572 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 LTFP02788 710 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 TCF3P15923 654 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 TNFAIP3P21580 790 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 HNRNPH3P31942 346 aaKnown RBP19.84■□□□□ 0.77
LMNB1-204ENST00000463908 KLHL30Q0D2K2 578 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 FCHO2Q0JRZ9 810 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 PTP4A2Q12974 167 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 ARID5BQ14865 1188 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 ZNF77Q15935 545 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 C10orf120Q5SQS8 335 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 BTBD8Q5XKL5 378 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 WDR59Q6PJI9 974 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 FAM183BPQ6ZVS7 135 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 TMC6Q7Z403 805 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 BPIFB1Q8TDL5 484 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 SH3RF2Q8TEC5 729 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 C18orf8Q96DM3 657 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 KIF9Q9HAQ2 790 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 ABCC13Q9NSE7 274 aa19.84■□□□□ 0.77
LMNB1-204ENST00000463908 LEFTY2O00292 366 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 DDX3XO00571 662 aaKnown RBP eCLIP19.83■□□□□ 0.772e-12■□□□□ 9.7
LMNB1-204ENST00000463908 PLEKP08567 350 aaPredicted RBP19.83■□□□□ 0.77
LMNB1-204ENST00000463908 MMP8P22894 467 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 ADKP55263 362 aaKnown RBP19.83■□□□□ 0.77
LMNB1-204ENST00000463908 ZXDAP98168 799 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 SLC6A3Q01959 620 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 CENPCQ03188 943 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 TRIM14Q14142 442 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 OR6B2Q6IFH4 312 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 OLFML1Q6UWY5 402 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 XYLT1Q86Y38 959 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 OR8K1Q8NGG5 319 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 DEPDC1BQ8WUY9 529 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 DNAJC7Q99615 494 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 TRMT61BQ9BVS5 477 aaKnown RBP19.83■□□□□ 0.77
LMNB1-204ENST00000463908 TAS2R14Q9NYV8 317 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 DNMT3LQ9UJW3 386 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 DUSP12Q9UNI6 340 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 NAALADL1Q9UQQ1 740 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 HCN4Q9Y3Q4 1203 aa19.83■□□□□ 0.77
LMNB1-204ENST00000463908 GREM1O60565 184 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 SERPING1P05155 500 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 GDI1P31150 447 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 YWHAZP63104 245 aaKnown RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 EFEMP1Q12805 493 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 USP4Q13107 963 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 IER5LQ5T953 404 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 SYPL2Q5VXT5 272 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 MMS22LQ6ZRQ5 1243 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 PHF13Q86YI8 300 aaPredicted RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 ZFYVE19Q96K21 471 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 CDK5RAP1Q96SZ6 601 aaKnown RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 FAM83CQ9BQN1 747 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 NACA2Q9H009 215 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 SYNCQ9H7C4 482 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 SEPT11Q9NVA2 429 aaKnown RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 ARHGAP20Q9P2F6 1191 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 BZW2Q9Y6E2 419 aaKnown RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 NUP210Q8TEM1 1887 aaPredicted RBP19.82■□□□□ 0.76
LMNB1-204ENST00000463908 MYO16Q9Y6X6 1858 aa19.82■□□□□ 0.76
LMNB1-204ENST00000463908 PI4K2BG5E9Z4 385 aa19.81■□□□□ 0.76
LMNB1-204ENST00000463908 ARNTLO00327 626 aa19.81■□□□□ 0.76
LMNB1-204ENST00000463908 SART1O43290 800 aaKnown RBP19.81■□□□□ 0.76
LMNB1-204ENST00000463908 DCXO43602 365 aa19.81■□□□□ 0.76
LMNB1-204ENST00000463908 SRFP11831 508 aa19.81■□□□□ 0.76
LMNB1-204ENST00000463908 SNX16P57768 344 aa19.81■□□□□ 0.76
LMNB1-204ENST00000463908 EFHC1Q5JVL4 640 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms