RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 RPLP0P6Q8NHW5 317 aa18.91■□□□□ 0.62
LINC00960-201ENST00000463183 TFAP2BQ92481 460 aa18.91■□□□□ 0.62
LINC00960-201ENST00000463183 ULBP1Q9BZM6 244 aa18.91■□□□□ 0.62
LINC00960-201ENST00000463183 UBE2TQ9NPD8 197 aaPredicted RBP18.91■□□□□ 0.62
LINC00960-201ENST00000463183 CYLDQ9NQC7 956 aa18.91■□□□□ 0.62
LINC00960-201ENST00000463183 LSM7Q9UK45 103 aaKnown RBP18.91■□□□□ 0.62
LINC00960-201ENST00000463183 M0QYV0 167 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 O00370 1275 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 XPO1O14980 1071 aaKnown RBP18.9■□□□□ 0.62
LINC00960-201ENST00000463183 PMM2O15305 246 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 LCP1P13796 627 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 OPRD1P41143 372 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 ADIGQ0VDE8 80 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 GJB7Q6PEY0 223 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 SIX6OS1Q8N1H7 587 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 KLF16Q9BXK1 252 aaPredicted RBP18.9■□□□□ 0.62
LINC00960-201ENST00000463183 DNMT3LQ9UJW3 386 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 SLC8A2Q9UPR5 921 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 USP3Q9Y6I4 520 aa18.9■□□□□ 0.62
LINC00960-201ENST00000463183 MYOFQ9NZM1 2061 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 TDGF1P13385 188 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 NRLP54845 237 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 YWHAGP61981 247 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC00960-201ENST00000463183 APBA1Q02410 837 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 SRSF5Q13243 272 aaKnown RBP18.89■□□□□ 0.61
LINC00960-201ENST00000463183 C2orf27AQ580R0 203 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 PRR23BQ6ZRT6 265 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 TADA2BQ86TJ2 420 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 C12orf40Q86WS4 652 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 ZBTB44Q8NCP5 570 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 EZH1Q92800 747 aaPredicted RBP18.89■□□□□ 0.61
LINC00960-201ENST00000463183 BHMTQ93088 406 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 KREMEN1Q96MU8 473 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 SEMA4AQ9H3S1 761 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 DACH1Q9UI36 760 aa18.89■□□□□ 0.61
LINC00960-201ENST00000463183 GVINP1Q7Z2Y8 2422 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 CFAP54Q96N23 3096 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 ANTXRLA6NF34 631 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 K7ESF4 209 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 PES1O00541 588 aaKnown RBP18.88■□□□□ 0.61
LINC00960-201ENST00000463183 ATG13O75143 517 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 ZBED1O96006 694 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 PAEPP09466 180 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 SLC9A1P19634 815 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 USP8P40818 1118 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 PSEN1P49768 467 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 GCNT1Q02742 428 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 ARHGAP44Q17R89 818 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 GAB4Q2WGN9 574 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 FBXO43Q4G163 708 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 BTBD8Q5XKL5 378 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 TPGS1Q6ZTW0 290 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 SECISBP2LQ93073 1101 aaKnown RBP18.88■□□□□ 0.61
LINC00960-201ENST00000463183 HHIPQ96QV1 700 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 FAM126AQ9BYI3 521 aaPredicted RBP18.88■□□□□ 0.61
LINC00960-201ENST00000463183 UBXN6Q9BZV1 441 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 KIAA1257Q9ULG3 409 aa18.88■□□□□ 0.61
LINC00960-201ENST00000463183 GOLGA6L22H0YM25 854 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 SETSIPP0DME0 302 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
LINC00960-201ENST00000463183 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 GAD2Q05329 585 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 MESP2Q0VG99 397 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 RAB41Q5JT25 222 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 LCLAT1Q6UWP7 414 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 MAMSTRQ6ZN01 415 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 GBP6Q6ZN66 633 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 CLEC17AQ6ZS10 378 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 TMEM25Q86YD3 366 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 SFTPA1Q8IWL2 248 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 DCLK2Q8N568 766 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 GPT2Q8TD30 523 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 EDEM1Q92611 657 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 PNKPQ96T60 521 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 ZSWIM1Q9BR11 485 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 ZDHHC4Q9NPG8 344 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 ARHGEF4Q9NR80 690 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 SPHK2Q9NRA0 654 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 CLIC5Q9NZA1 410 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 NCDNQ9UBB6 729 aa18.87■□□□□ 0.61
LINC00960-201ENST00000463183 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00960-201ENST00000463183 SMG5Q9UPR3 1016 aaKnown RBP18.87■□□□□ 0.61
LINC00960-201ENST00000463183 FANCMQ8IYD8 2048 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 SLC12A8A0AV02 714 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 APODP05090 189 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 TRIM65Q6PJ69 517 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 FAM114A1Q8IWE2 563 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 CCDC33Q8N5R6 958 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 KIAA1958Q8N8K9 716 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 SUMF1Q8NBK3 374 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 NELL1Q92832 810 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 OTUB2Q96DC9 234 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 CDK5RAP1Q96SZ6 601 aaKnown RBP18.86■□□□□ 0.61
LINC00960-201ENST00000463183 THAP9Q9H5L6 903 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 MARCH2Q9P0N8 246 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 STRIP2Q9ULQ0 834 aa18.86■□□□□ 0.61
LINC00960-201ENST00000463183 LILRB5O75023 590 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms