RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 PCDHB2Q9Y5E7 798 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 MAD1L1Q9Y6D9 718 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 CCDC162PA2VCL2 907 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 TMEM114B3SHH9 223 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 O00370 1275 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 ACSL4O60488 711 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 TRMUO75648 421 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 ESRRAP11474 423 aaPredicted RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 CDH3P22223 829 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 IFNA8P32881 189 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 S100A5P33763 92 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 TUBA4AP68366 448 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 POU5F1BQ06416 359 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 KCNMA1Q12791 1236 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 SKIV2LQ15477 1246 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 KCNJ8Q15842 424 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 C15orf59Q2T9L4 293 aaPredicted RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 BBS9Q3SYG4 887 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 IFIT1BQ5T764 474 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 SPOPLQ6IQ16 392 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 C4orf50Q6ZRC1 276 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 ZNF589Q86UQ0 364 aaPredicted RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 SGMS1Q86VZ5 419 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 DEPDC4Q8N2C3 294 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 PRSS33Q8NF86 280 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 TNIP2Q8NFZ5 429 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 VN1R2Q8NFZ6 395 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 PSKH2Q96QS6 385 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 ECSITQ9BQ95 431 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 LLPHQ9BRT6 129 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 IFIH1Q9BYX4 1025 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 RNF38Q9H0F5 515 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 RSPH9Q9H1X1 276 aaPredicted RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 ALG13Q9NP73 1137 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 AVENQ9NQS1 362 aaPredicted RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 SACM1LQ9NTJ5 587 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
CLK1-207ENST00000461981 COL20A1Q9P218 1284 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
CLK1-207ENST00000461981 GOLGA8CPA6NN73 597 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 H3BUI4 141 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 NOP56O00567 594 aaKnown RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 POLR2DO15514 142 aaKnown RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 DAPK3O43293 454 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TSPAN1O60635 241 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 USP1O94782 785 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 BAG2O95816 211 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CRYZL1O95825 349 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 NR4A1P22736 598 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 SLC5A2P31639 672 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 IRS1P35568 1242 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 THPOP40225 353 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 AMPD3Q01432 767 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 ITGA9Q13797 1035 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 SLC39A14Q15043 492 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 SPA17Q15506 151 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 RNF19BQ6ZMZ0 732 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TBC1D10CQ8IV04 446 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PAF1Q8N7H5 531 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 ZFP28Q8NHY6 868 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 SLC7A6OSQ96CW6 309 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TBCBQ99426 244 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TLR10Q9BXR5 811 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CELF4Q9BZC1 486 aaKnown RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 ISCUQ9H1K1 167 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 HOMER2Q9NSB8 354 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TBK1Q9UHD2 729 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PCDHA1Q9Y5I3 950 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 IKBKGQ9Y6K9 419 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 KLRF2D3W0D1 207 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 LRP3O75074 770 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 DCTN3O75935 186 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PLEKP08567 350 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 FDPSP14324 419 aaKnown RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 HMOX2P30519 316 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 ADSLP30566 484 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 CIITAP33076 1130 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 AFMP43652 599 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 COPB1P53618 953 aaKnown RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 GRIK4Q16099 956 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PHKG1Q16816 387 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 SYCP2LQ5T4T6 812 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CDKAL1Q5VV42 579 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 PAOXQ6QHF9 649 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CYP4V2Q6ZWL3 525 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 TMC3Q7Z5M5 1100 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 LILRB2Q8N423 598 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 Q8N9G6 341 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 NCOA7Q8NI08 942 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 ACMSDQ8TDX5 336 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 ACTRT2Q8TDY3 377 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 CEP63Q96MT8 703 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 TTC1Q99614 292 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 INO80BQ9C086 356 aaPredicted RBP6.11□□□□□ -1.43
CLK1-207ENST00000461981 TBC1D22BQ9NU19 505 aa6.11□□□□□ -1.43
CLK1-207ENST00000461981 AGPAT5Q9NUQ2 364 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms