RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ZNF707Q96C28 371 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 ACSF2Q96CM8 615 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 ASIC4Q96FT7 647 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SMOQ99835 787 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 PNPLA8Q9NP80 782 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 TJP2Q9UDY2 1190 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SORCS3Q9UPU3 1222 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 HYOU1Q9Y4L1 999 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 ALG6Q9Y672 507 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SAR1BQ9Y6B6 198 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 CDY1Q9Y6F8 540 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 TBC1D4O60343 1298 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 ZMYND10O75800 440 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 ATP1A1P05023 1023 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 SPATA31D3P0C874 917 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 TCP1P17987 556 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 RPL17P18621 184 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 SP100P23497 879 aaPredicted RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 MAGEA11P43364 429 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 TKTL1P51854 596 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 CDR1P51861 262 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 PPP1R15BQ5SWA1 713 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 PAPD7Q5XG87 772 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 SPATA31D4Q6ZUB0 917 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 GOLGA1Q92805 767 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 KCNK16Q96T55 309 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 PRKD2Q9BZL6 878 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 FBXW11Q9UKB1 542 aa15.91■□□□□ 0.14
TMEM39A-203ENST00000461654 TCRBV5S1A1TA0A578 114 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 F8VP50 259 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PAPSS1O43252 624 aaPredicted RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 RFPL2O75678 378 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 BEST1O76090 585 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 HNRNPA1P09651 372 aaKnown RBP eCLIP15.9■□□□□ 0.143e-6■■■■□ 19.4
TMEM39A-203ENST00000461654 PRLRP16471 622 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 COMTP21964 271 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 CYP2F1P24903 491 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PSMA2P25787 234 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 HOXA9P31269 272 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 MAN1A1P33908 653 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 OR1D2P34982 312 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 RFC1P35251 1148 aaPredicted RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PLA2G5P39877 138 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 SSR1P43307 286 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 RPL7AP62424 266 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 RPL10AP62906 217 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 MTMR3Q13615 1198 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 SLC8B1Q6J4K2 584 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 OLFML1Q6UWY5 402 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 FNIP1Q8TF40 1166 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PBXIP1Q96AQ6 731 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 BTBD6Q96KE9 485 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 C8orf48Q96LL4 319 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PGLYRP2Q96PD5 576 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 GOLPH3Q9H4A6 298 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 CNGB3Q9NQW8 809 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 LIMD1Q9UGP4 676 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 SNX12Q9UMY4 172 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 PLXNA3P51805 1871 aa15.9■□□□□ 0.14
TMEM39A-203ENST00000461654 TECTAO75443 2155 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 DENND4AQ7Z401 1863 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 MTMR11A4FU01 709 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 HSF2BPO75031 334 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 GJB6O95452 261 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 GLI1P08151 1106 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 POU2F2P09086 479 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 GPD1P21695 349 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 SDC4P31431 198 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 TUFMP49411 452 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 DNA2P51530 1060 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 ACAP1Q15027 740 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 MGAT5BQ3V5L5 792 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 TPGS2Q68CL5 300 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 SLC26A9Q7LBE3 791 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 ZMIZ2Q8NF64 920 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 SMG7Q92540 1137 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 NCAPGQ9BPX3 1015 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 TRIM62Q9BVG3 475 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 TLR10Q9BXR5 811 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 ASNSD1Q9NWL6 643 aa15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.89■□□□□ 0.13
TMEM39A-203ENST00000461654 MTCL1Q9Y4B5 1905 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 ADAM12O43184 909 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 RNF8O76064 485 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 ZBED1O96006 694 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 PDGFRAP16234 1089 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 ZNF143P52747 638 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 CACNA2D1P54289 1103 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 ROR1Q01973 937 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 RAB41Q5JT25 222 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 RSPO2Q6UXX9 243 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 RNF19BQ6ZMZ0 732 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 ARCQ7LC44 396 aa15.88■□□□□ 0.13
TMEM39A-203ENST00000461654 FBXL6Q8N531 539 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms