RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NAB2Q15742 525 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CCNG2Q16589 344 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SGO1Q5FBB7 561 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 POMGNT2Q8NAT1 580 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SNRNP27Q8WVK2 155 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 LRRC39Q96DD0 335 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 VTA1Q9NP79 307 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 COMMD8Q9NX08 183 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 KDM6BO15054 1643 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ARHGEF28Q8N1W1 1705 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 NUP214P35658 2090 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MGRN1O60291 552 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MTA2O94776 668 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ASS1P00966 412 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 SRGNP10124 158 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF135P52742 658 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 SLC25A24Q6NUK1 477 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 CCDC81Q6ZN84 652 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PDCD10Q9BUL8 212 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 EIF4E1BA6NMX2 242 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 KATNA1O75449 491 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 URODP06132 367 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PTPN7P35236 360 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 HPDLQ96IR7 371 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MPP4Q96JB8 637 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PABPC3Q9H361 631 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 CD209Q9NNX6 404 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MAGEB16A2A368 324 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MAPKAPK2P49137 400 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 RAB27AP51159 221 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 HK2P52789 917 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 RAD23AP54725 363 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 CCNI2Q6ZMN8 369 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PPP1R14BQ96C90 147 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 AGAP3Q96P47 875 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 APOL4Q9BPW4 351 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 TBC1D13Q9NVG8 400 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 TUBE1Q9UJT0 475 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 VAV3Q9UKW4 847 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ANKRD6Q9Y2G4 727 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 HOXB8P17481 243 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 HMGCS2P54868 508 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 SERAC1Q96JX3 654 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ERP44Q9BS26 406 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PLA2G4CQ9UP65 541 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MEI4A8MW99 385 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MYL6P60660 151 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 MYBPC2Q14324 1141 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 TCEA2Q15560 299 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 ATP6AP1LQ52LC2 224 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 PCNX4Q63HM2 1172 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 RNFT2Q96EX2 444 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 EFCAB1Q9HAE3 211 aa9.15□□□□□ -0.94
SHROOM4-203ENST00000460112 CALB2P22676 271 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 GRK2P25098 689 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 LRRC14Q15048 493 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 STRIP1Q5VSL9 837 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 ESRP1Q6NXG1 681 aaKnown RBP9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 MAGEC3Q8TD91 643 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 C17orf50Q8WW18 174 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 ANKEF1Q9NU02 776 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 ATAD3AQ9NVI7 634 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 MINPP1Q9UNW1 487 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 PLAGL2Q9UPG8 496 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 PCDHB12Q9Y5F1 795 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP2A6P11509 494 aaPredicted RBP9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 ZNF23P17027 643 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 ACADLP28330 430 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 FEN1P39748 380 aaKnown RBP9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 FBXO42Q6P3S6 717 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM220AQ7Z4H9 259 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 COMMD2Q86X83 199 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 THTPAQ9BU02 230 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 TNS3Q68CZ2 1445 aa9.15□□□□□ -0.95
SHROOM4-203ENST00000460112 A0A087WZ62 844 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 SDR42E2A6NKP2 422 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 HS6ST1O60243 411 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 GZMAP12544 262 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 ATP1A3P13637 1013 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 WARSP23381 471 aaKnown RBP9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 MLH1P40692 756 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 GPR1P46091 355 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 GJA8P48165 433 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 TAF2Q6P1X5 1199 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 CAVIN3Q969G5 261 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 FMN2Q9NZ56 1722 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 LRRC14BA6NHZ5 514 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP2C9P11712 490 aa9.14□□□□□ -0.95
SHROOM4-203ENST00000460112 ITGB6P18564 788 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms